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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ZNF28

Summary for ZNF28

Gene informationGene symbol

ZNF28

Ensembl ID

ENSG00000198538

Entrez ID

7576

Gene namezinc finger protein 28
SynonymsDKFZp781D0275|KOX24
Gene typeprotein_coding
UniProtAcc

P17035


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Dataset with differentially expressed gene: ZNF28

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-1.034033.92e-03

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Expression of ZNF28 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ZNF28

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ZNF28

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ZNF28hsa-miR-3064-3p99.9072NM_006969
ZNF28hsa-miR-3925-3p99.8019NM_006969
ZNF28hsa-miR-6833-3p99.7223NM_006969
ZNF28hsa-miR-4768-5p99.6339NM_006969
ZNF28hsa-miR-127298.5308NM_006969
ZNF28hsa-miR-624-3p98.3687NM_006969
ZNF28hsa-miR-10393-5p97.8624NM_006969
ZNF28hsa-miR-6809-3p96.7877NM_006969
ZNF28hsa-miR-6873-3p95.8104NM_006969
ZNF28hsa-miR-445294.8743NM_006969
ZNF28hsa-miR-513b-3p94.0218NM_006969
ZNF28hsa-miR-766-3p93.2777NM_006969
ZNF28hsa-miR-19b-2-5p92.5681NM_006969
ZNF28hsa-miR-19b-1-5p92.5681NM_006969
ZNF28hsa-miR-19a-5p92.5681NM_006969
ZNF28hsa-miR-469892.5648NM_006969
ZNF28hsa-miR-6845-3p92.1023NM_006969
ZNF28hsa-miR-6773-3p91.8613NM_006969
ZNF28hsa-miR-17-3p91.7674NM_006969
ZNF28hsa-miR-29b-3p90.429NM_006969
ZNF28hsa-miR-29c-3p90.429NM_006969
ZNF28hsa-miR-29a-3p90.429NM_006969
ZNF28hsa-miR-1212289.4947NM_006969
ZNF28hsa-miR-758-3p89.2814NM_006969
ZNF28hsa-miR-296-3p88.1746NM_006969
ZNF28hsa-miR-568287.9872NM_006969
ZNF28hsa-miR-1915-5p87.4368NM_006969
ZNF28hsa-miR-519e-5p87.4079NM_006969
ZNF28hsa-miR-515-5p87.4079NM_006969
ZNF28hsa-miR-590-3p87.3243NM_006969
ZNF28hsa-miR-6500-3p87.1189NM_006969
ZNF28hsa-miR-134-5p86.9322NM_006969
ZNF28hsa-miR-311886.9322NM_006969
ZNF28hsa-miR-1212185.9048NM_006969
ZNF28hsa-miR-4715-3p85.9048NM_006969
ZNF28hsa-miR-548d-3p84.9122NM_006969
ZNF28hsa-miR-548ac84.9122NM_006969
ZNF28hsa-miR-548h-3p84.9122NM_006969
ZNF28hsa-miR-548z84.9122NM_006969
ZNF28hsa-miR-548bb-3p84.9122NM_006969
ZNF28hsa-miR-183-3p84.2266NM_006969
ZNF28hsa-miR-316483.6217NM_006969
ZNF28hsa-miR-314383.4255NM_006969
ZNF28hsa-miR-127682.8537NM_006969
ZNF28hsa-miR-474882.4985NM_006969
ZNF28hsa-miR-446482.4985NM_006969
ZNF28hsa-miR-314882.0504NM_006969
ZNF28hsa-miR-452881.4128NM_006969
ZNF28hsa-miR-371b-5p80.847NM_006969
ZNF28hsa-miR-373-5p80.847NM_006969
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Motifs and transcription factors (TFs) regulating ZNF28

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."