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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ZFHX3

Summary for ZFHX3

Gene informationGene symbol

ZFHX3

Ensembl ID

ENSG00000140836

Entrez ID

463

Gene namezinc finger homeobox 3
SynonymsATBF1|C16orf47|FLJ26184|ZNF927
Gene typeprotein_coding
UniProtAcc

Q15911


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Dataset with differentially expressed gene: ZFHX3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.5242080.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.3226872.93e-11

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.5322130.00e+00

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Expression of ZFHX3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ZFHX3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ZFHX3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ZFHX3hsa-miR-5011-5p99.9727NM_001164766
ZFHX3hsa-miR-548ar-3p99.8542NM_001164766
ZFHX3hsa-miR-548e-3p99.8178NM_001164766
ZFHX3hsa-miR-548f-3p99.8178NM_001164766
ZFHX3hsa-miR-548bc99.8178NM_001164766
ZFHX3hsa-miR-548az-3p99.8178NM_001164766
ZFHX3hsa-miR-806899.8065NM_001164766
ZFHX3hsa-miR-548a-3p99.7643NM_001164766
ZFHX3hsa-miR-5582-3p99.52NM_001164766
ZFHX3hsa-miR-568899.4399NM_001164766
ZFHX3hsa-miR-495-3p99.2949NM_001164766
ZFHX3hsa-miR-6867-5p99.2654NM_001164766
ZFHX3hsa-miR-3613-3p99.1077NM_001164766
ZFHX3hsa-miR-190a-3p99.0845NM_001164766
ZFHX3hsa-miR-29b-2-5p98.7633NM_001164766
ZFHX3hsa-miR-7-1-3p98.7421NM_001164766
ZFHX3hsa-miR-9983-3p98.6488NM_001164766
ZFHX3hsa-miR-7-2-3p98.6014NM_001164766
ZFHX3hsa-miR-153-5p98.5322NM_001164766
ZFHX3hsa-miR-451b98.4013NM_001164766
ZFHX3hsa-miR-510-3p98.3928NM_001164766
ZFHX3hsa-miR-1233-5p97.9126NM_001164766
ZFHX3hsa-miR-6778-5p97.9126NM_001164766
ZFHX3hsa-miR-129-5p97.537NM_001164766
ZFHX3hsa-miR-4760-3p97.5122NM_001164766
ZFHX3hsa-miR-3529-3p97.4591NM_001164766
ZFHX3hsa-miR-92297.4059NM_001164766
ZFHX3hsa-miR-429197.1372NM_001164766
ZFHX3hsa-miR-316396.3183NM_001164766
ZFHX3hsa-miR-27a-3p96.2675NM_001164766
ZFHX3hsa-miR-27b-3p96.2675NM_001164766
ZFHX3hsa-miR-181d-3p96.2301NM_001164766
ZFHX3hsa-miR-494-3p96.0946NM_001164766
ZFHX3hsa-miR-807695.9872NM_001164766
ZFHX3hsa-miR-548j-3p95.826NM_001164766
ZFHX3hsa-miR-998595.5552NM_001164766
ZFHX3hsa-miR-548aj-3p95.5261NM_001164766
ZFHX3hsa-miR-548x-3p95.5261NM_001164766
ZFHX3hsa-miR-548aq-3p95.2918NM_001164766
ZFHX3hsa-miR-548am-3p95.2918NM_001164766
ZFHX3hsa-miR-548ah-3p95.2918NM_001164766
ZFHX3hsa-miR-548ae-3p95.2918NM_001164766
ZFHX3hsa-miR-381-3p95.0729NM_001164766
ZFHX3hsa-miR-30095.0729NM_001164766
ZFHX3hsa-miR-664b-3p94.7818NM_001164766
ZFHX3hsa-miR-579-3p94.7818NM_001164766
ZFHX3hsa-miR-4795-3p94.7812NM_001164766
ZFHX3hsa-miR-442294.641NM_001164766
ZFHX3hsa-miR-30e-3p94.5438NM_001164766
ZFHX3hsa-miR-30d-3p94.5438NM_001164766
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Motifs and transcription factors (TFs) regulating ZFHX3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ZFHX3hdpi__NFIXNFIX (directAnnotation).
ZFHX3transfac_pro__M03813POU3F3 (directAnnotation).
ZFHX3hocomoco__MNX1_HUMAN.H11MO.0.DMNX1 (directAnnotation).
ZFHX3hdpi__ZNF193ZSCAN9 (directAnnotation).
ZFHX3hdpi__FOXM1FOXM1 (directAnnotation).
ZFHX3hocomoco__OTX1_HUMAN.H11MO.0.DOTX1 (directAnnotation).
ZFHX3transfac_pro__M05768ZNF544 (directAnnotation).
ZFHX3taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
ZFHX3transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ZFHX3transfac_pro__M07397ZNF148 (directAnnotation).
ZFHX3metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
ZFHX3metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
ZFHX3dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
ZFHX3taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
ZFHX3metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
ZFHX3metacluster_7.13ZFX (directAnnotation).
ZFHX3metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
ZFHX3homer__GGGGGGGG_MazMAZ (directAnnotation).
ZFHX3transfac_pro__M01175ZBTB7B (directAnnotation).
ZFHX3taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
ZFHX3tfdimers__MD00151CHURC1 (directAnnotation).
ZFHX3metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
ZFHX3metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
ZFHX3transfac_pro__M01303SP1 (directAnnotation).
ZFHX3metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
ZFHX3swissregulon__hs__CHD1CHD1 (directAnnotation).
ZFHX3transfac_pro__M02090E2F4 (directAnnotation).
ZFHX3metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
ZFHX3jaspar__MA1122.1TFDP1 (directAnnotation).
ZFHX3hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
ZFHX3transfac_pro__M02089E2F3 (directAnnotation).
ZFHX3metacluster_3.14WT1; WT1 (directAnnotation).
ZFHX3metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
ZFHX3metacluster_126.3LIN28B; LIN28B (directAnnotation).
ZFHX3hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
ZFHX3metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
ZFHX3cisbp__M07938E2F1 (directAnnotation).
ZFHX3kznf__ZNF202_Imbeault2017_OM_MEMEZNF202 (directAnnotation).
ZFHX3homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
ZFHX3transfac_pro__M07436WT1 (directAnnotation).
ZFHX3transfac_pro__M02281SP1 (directAnnotation).
ZFHX3taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
ZFHX3kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
ZFHX3metacluster_3.3KLF10; KLF15; KLF16; KLF9; SP1 (directAnnotation).
ZFHX3transfac_pro__M02898SMAD3 (directAnnotation).
ZFHX3transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
ZFHX3metacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
ZFHX3taipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
ZFHX3transfac_pro__M01783SP2 (directAnnotation).
ZFHX3metacluster_144.8ZNF30; ZNF30 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."