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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: USP10

Summary for USP10

Gene informationGene symbol

USP10

Ensembl ID

ENSG00000103194

Entrez ID

9100

Gene nameubiquitin specific peptidase 10
SynonymsKIAA0190|UBPO
Gene typeprotein_coding
UniProtAcc

Q14694


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Dataset with differentially expressed gene: USP10

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.5980510.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.2817716.82e-12

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.3358792.91e-15

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.78032.18e-18

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.2955430.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.8403240.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.3419820.00e+00

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Expression of USP10 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to USP10

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating USP10

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
USP10hsa-miR-3177-5p99.6485NM_001272075
USP10hsa-miR-149-5p96.2716NM_001272075
USP10hsa-miR-7157-5p95.4791NM_001272075
USP10hsa-miR-431095.2554NM_001272075
USP10hsa-miR-374a-3p95.0813NM_001272075
USP10hsa-miR-138-5p95.0069NM_001272075
USP10hsa-miR-3145-5p94.6032NM_001272075
USP10hsa-miR-153-5p94.4636NM_001272075
USP10hsa-miR-4764-3p94.2594NM_001272075
USP10hsa-miR-471993.864NM_001272075
USP10hsa-miR-4477b93.819NM_001272075
USP10hsa-miR-5197-5p93.6881NM_001272075
USP10hsa-miR-891b93.6718NM_001272075
USP10hsa-miR-950093.2828NM_001272075
USP10hsa-miR-7856-5p92.9695NM_001272075
USP10hsa-miR-6833-3p92.5508NM_001272075
USP10hsa-miR-519d-5p92.0293NM_001272075
USP10hsa-miR-6873-3p91.4584NM_001272075
USP10hsa-miR-548x-3p90.894NM_001272075
USP10hsa-miR-548aj-3p90.894NM_001272075
USP10hsa-miR-807090.7025NM_001272075
USP10hsa-miR-7152-5p90.5718NM_001272075
USP10hsa-miR-1250-3p90.2603NM_001272075
USP10hsa-miR-4768-5p90.1717NM_001272075
USP10hsa-miR-335-3p89.7162NM_001272075
USP10hsa-miR-892a89.6533NM_001272075
USP10hsa-miR-892b89.5186NM_001272075
USP10hsa-miR-548ah-3p88.1587NM_001272075
USP10hsa-miR-548aq-3p88.1587NM_001272075
USP10hsa-miR-548am-3p88.1587NM_001272075
USP10hsa-miR-548ae-3p88.1587NM_001272075
USP10hsa-miR-548j-3p88.1587NM_001272075
USP10hsa-miR-5010-3p87.8792NM_001272075
USP10hsa-miR-92286.5903NM_001272075
USP10hsa-miR-205-3p86.2685NM_001272075
USP10hsa-miR-63485.5645NM_001272075
USP10hsa-miR-472982.7268NM_001272075
USP10hsa-miR-3613-3p81.8892NM_001272075
USP10hsa-miR-126-5p81.191NM_001272075
USP10hsa-miR-446881.1051NM_001272075
USP10hsa-miR-59580.7239NM_001272075
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Motifs and transcription factors (TFs) regulating USP10

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
USP10hocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
USP10metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
USP10metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
USP10taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
USP10transfac_pro__M04950EGR1 (directAnnotation).
USP10taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
USP10taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
USP10taipale_tf_pairs__ERF_HES7_NNCACGTGNNNNCCGGAANN_CAP_reprERF; HES7 (directAnnotation).
USP10taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
USP10transfac_pro__M00652NRF1 (directAnnotation).
USP10hdpi__ETV4ETV4 (directAnnotation).
USP10taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
USP10transfac_pro__M04866HDAC2 (directAnnotation).
USP10jaspar__MA1122.1TFDP1 (directAnnotation).
USP10swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
USP10metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
USP10transfac_pro__M01182HINFP (directAnnotation).
USP10jaspar__MA1933.1SREBF2 (directAnnotation).
USP10cisbp__M02645ETS1 (directAnnotation).
USP10dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
USP10taipale_tf_pairs__TFAP2C_MAX_TNSCCNNNGGSNNNCACGTGN_CAP_reprMAX; TFAP2C (directAnnotation).
USP10metacluster_135.11NR2C2 (directAnnotation).
USP10metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
USP10tfdimers__MD00038TFAP2C (directAnnotation).
USP10metacluster_144.3ZNF704; ZNF704 (directAnnotation).
USP10metacluster_7.13ZFX (directAnnotation).
USP10kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
USP10cisbp__M00968MTF2 (directAnnotation).
USP10metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
USP10metacluster_160.20JUND; PRDM15 (directAnnotation).
USP10cisbp__M00341PAX6 (directAnnotation).
USP10metacluster_198.3ZFP64 (directAnnotation).
USP10metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
USP10metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
USP10jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
USP10metacluster_61.1DEAF1; DEAF1 (directAnnotation).
USP10cisbp__M00788ZFY (inferredBy_Orthology).
USP10kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
USP10metacluster_175.1ZNF283 (directAnnotation).
USP10hdpi__ZNF304ZNF304 (directAnnotation).
USP10transfac_pro__M02844BCL6B (inferredBy_Orthology).
USP10metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
USP10metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
USP10transfac_pro__M01199TRIM28 (directAnnotation).
USP10kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
USP10metacluster_151.2ZNF23 (directAnnotation).
USP10transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
USP10transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
USP10transfac_pro__M03806ZBTB7C (directAnnotation).
USP10transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."