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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: UBE2W

Summary for UBE2W

Gene informationGene symbol

UBE2W

Ensembl ID

ENSG00000104343

Entrez ID

55284

Gene nameubiquitin conjugating enzyme E2 W
SynonymsFLJ11011|UBC-16
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: UBE2W

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.2781252.77e-23

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4691710.00e+00

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Expression of UBE2W in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to UBE2W

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating UBE2W

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
UBE2Whsa-miR-5692a99.9629NM_001001481
UBE2Whsa-miR-548e-5p99.5968NM_001001481
UBE2Whsa-miR-316398.876NM_001001481
UBE2Whsa-miR-548c-3p98.2285NM_001001481
UBE2Whsa-miR-314898.0381NM_001001481
UBE2Whsa-miR-44897.2223NM_018299
UBE2Whsa-miR-93897.1665NM_018299
UBE2Whsa-miR-480396.8657NM_001001481
UBE2Whsa-miR-4756-3p96.7299NM_001001481
UBE2Whsa-miR-426196.1769NM_018299
UBE2Whsa-miR-54396.1731NM_001001481
UBE2Whsa-miR-4722-5p96.0595NM_001001481
UBE2Whsa-miR-431796.0017NM_001001481
UBE2Whsa-miR-1250-3p94.8374NM_001001481
UBE2Whsa-miR-126-5p94.7595NM_001001481
UBE2Whsa-miR-4774-3p94.591NM_018299
UBE2Whsa-miR-715094.4651NM_001001481
UBE2Whsa-miR-580-5p94.3961NM_018299
UBE2Whsa-miR-3529-3p94.3549NM_001001481
UBE2Whsa-miR-3680-3p94.3519NM_018299
UBE2Whsa-miR-590-3p94.1879NM_018299
UBE2Whsa-miR-147b-5p93.9855NM_018299
UBE2Whsa-miR-92b-3p93.894NM_001001481
UBE2Whsa-miR-92a-3p93.894NM_001001481
UBE2Whsa-miR-32-5p93.894NM_001001481
UBE2Whsa-miR-120593.4833NM_001001481
UBE2Whsa-miR-10394-5p93.4833NM_001001481
UBE2Whsa-miR-4795-3p93.4063NM_001001481
UBE2Whsa-miR-314393.271NM_001001481
UBE2Whsa-miR-428293.1427NM_018299
UBE2Whsa-miR-313393.0743NM_001001481
UBE2Whsa-miR-477592.8778NM_018299
UBE2Whsa-miR-373-5p92.7851NM_001001481
UBE2Whsa-miR-371b-5p92.7851NM_001001481
UBE2Whsa-miR-616-5p92.7851NM_001001481
UBE2Whsa-miR-3065-5p92.5556NM_001001481
UBE2Whsa-miR-25-3p92.4684NM_001001481
UBE2Whsa-miR-367-3p92.4684NM_001001481
UBE2Whsa-miR-363-3p92.4684NM_001001481
UBE2Whsa-miR-449992.306NM_018299
UBE2Whsa-miR-1213691.685NM_001001481
UBE2Whsa-miR-4694-3p91.2497NM_001001481
UBE2Whsa-miR-132391.1944NM_001001481
UBE2Whsa-miR-442291.192NM_001001481
UBE2Whsa-miR-6890-3p90.9896NM_001001481
UBE2Whsa-miR-311990.6398NM_018299
UBE2Whsa-miR-475990.5031NM_018299
UBE2Whsa-miR-391990.3263NM_001001481
UBE2Whsa-miR-548o-3p90.1277NM_001001481
UBE2Whsa-miR-7159-5p90.1223NM_018299
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Motifs and transcription factors (TFs) regulating UBE2W

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
UBE2Wmetacluster_135.11NR2C2 (directAnnotation).
UBE2Wmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
UBE2Wmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
UBE2Wmetacluster_7.13ZFX (directAnnotation).
UBE2Wkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
UBE2Wcisbp__M00968MTF2 (directAnnotation).
UBE2Wmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
UBE2Wmetacluster_160.20JUND; PRDM15 (directAnnotation).
UBE2Wcisbp__M00341PAX6 (directAnnotation).
UBE2Wmetacluster_198.3ZFP64 (directAnnotation).
UBE2Wmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
UBE2Wmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
UBE2Wjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
UBE2Wmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
UBE2Wcisbp__M00788ZFY (inferredBy_Orthology).
UBE2Wkznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
UBE2Wmetacluster_175.1ZNF283 (directAnnotation).
UBE2Whdpi__ZNF304ZNF304 (directAnnotation).
UBE2Wtransfac_pro__M02844BCL6B (inferredBy_Orthology).
UBE2Wmetacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
UBE2Wmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
UBE2Wtransfac_pro__M01199TRIM28 (directAnnotation).
UBE2Wkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
UBE2Wmetacluster_151.2ZNF23 (directAnnotation).
UBE2Wtransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
UBE2Wtransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
UBE2Wtransfac_pro__M03806ZBTB7C (directAnnotation).
UBE2Wtransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
UBE2Wmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
UBE2Wmetacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
UBE2Wtfdimers__MD00154MZF1; SREBF1 (directAnnotation).
UBE2Wcisbp__M00249WT1 (directAnnotation).
UBE2Wcisbp__M01863ZNF711 (inferredBy_Orthology).
UBE2Wtaipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
UBE2Whomer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
UBE2Wtaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
UBE2Wkznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."