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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: UBASH3B

Summary for UBASH3B

Gene informationGene symbol

UBASH3B

Ensembl ID

ENSG00000154127

Entrez ID

84959

Gene nameubiquitin associated and SH3 domain containing B
SynonymsKIAA1959|STS-1|TULA-2|TULA2
Gene typeprotein_coding
UniProtAcc

Q8TF42


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Dataset with differentially expressed gene: UBASH3B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.27941.19e-04

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.6013671.05e-40

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.367475.79e-19

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.4058460.00e+00

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Expression of UBASH3B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to UBASH3B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating UBASH3B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
UBASH3Bhsa-miR-519d-5p96.9595NM_032873
UBASH3Bhsa-miR-127096.3238NM_032873
UBASH3Bhsa-miR-62096.3238NM_032873
UBASH3Bhsa-miR-472996.1783NM_032873
UBASH3Bhsa-miR-59594.8463NM_032873
UBASH3Bhsa-miR-4758-5p94.8152NM_032873
UBASH3Bhsa-miR-1238-5p94.8152NM_032873
UBASH3Bhsa-miR-190b-3p92.8354NM_032873
UBASH3Bhsa-miR-430392.6794NM_032873
UBASH3Bhsa-miR-510091.9496NM_032873
UBASH3Bhsa-miR-6766-3p91.1738NM_032873
UBASH3Bhsa-miR-4782-3p91.1738NM_032873
UBASH3Bhsa-miR-219a-5p91.1738NM_032873
UBASH3Bhsa-miR-92b-3p90.8521NM_032873
UBASH3Bhsa-miR-32-5p90.8521NM_032873
UBASH3Bhsa-miR-92a-3p90.8521NM_032873
UBASH3Bhsa-miR-450b-5p90.7448NM_032873
UBASH3Bhsa-miR-367190.7212NM_032873
UBASH3Bhsa-miR-9983-3p90.4137NM_032873
UBASH3Bhsa-miR-182-5p90.0426NM_032873
UBASH3Bhsa-miR-451189.3568NM_032873
UBASH3Bhsa-miR-129-5p88.9559NM_032873
UBASH3Bhsa-miR-58688.7029NM_032873
UBASH3Bhsa-miR-25-3p88.2657NM_032873
UBASH3Bhsa-miR-363-3p88.2657NM_032873
UBASH3Bhsa-miR-367-3p88.2657NM_032873
UBASH3Bhsa-miR-548l88.1597NM_032873
UBASH3Bhsa-miR-5187-3p87.8488NM_032873
UBASH3Bhsa-miR-520d-5p86.1125NM_032873
UBASH3Bhsa-miR-524-5p86.1125NM_032873
UBASH3Bhsa-miR-9-5p85.8865NM_032873
UBASH3Bhsa-miR-6772-3p85.8695NM_032873
UBASH3Bhsa-miR-515-5p85.7139NM_032873
UBASH3Bhsa-miR-519e-5p85.7139NM_032873
UBASH3Bhsa-miR-360985.6584NM_032873
UBASH3Bhsa-miR-548ah-5p85.6584NM_032873
UBASH3Bhsa-miR-6753-5p85.1474NM_032873
UBASH3Bhsa-miR-452-3p85.1302NM_032873
UBASH3Bhsa-miR-4732-3p83.9094NM_032873
UBASH3Bhsa-miR-510-3p83.6709NM_032873
UBASH3Bhsa-miR-4742-3p83.6183NM_032873
UBASH3Bhsa-miR-323a-3p83.4643NM_032873
UBASH3Bhsa-miR-3157-5p83.392NM_032873
UBASH3Bhsa-miR-1252-3p82.9491NM_032873
UBASH3Bhsa-miR-430882.9341NM_032873
UBASH3Bhsa-miR-3192-5p82.8757NM_032873
UBASH3Bhsa-miR-486-5p82.6519NM_032873
UBASH3Bhsa-miR-3059-5p82.4411NM_032873
UBASH3Bhsa-miR-364682.2795NM_032873
UBASH3Bhsa-miR-6780a-3p81.9913NM_032873
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Motifs and transcription factors (TFs) regulating UBASH3B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
UBASH3Btaipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
UBASH3Bjaspar__MA1483.2ELF2 (directAnnotation).
UBASH3Btransfac_pro__M05628ZNF735 (directAnnotation).
UBASH3Bkznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
UBASH3Btaipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
UBASH3Bmetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
UBASH3Bkznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
UBASH3Bmetacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
UBASH3Btaipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
UBASH3Btaipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
UBASH3Bmetacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
UBASH3Btransfac_pro__M04748GABPA (directAnnotation).
UBASH3Bswissregulon__hs__ELF2ELF2 (directAnnotation).
UBASH3Bmetacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
UBASH3Bmetacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
UBASH3Btaipale_tf_pairs__ERF_FOXI1_RSCGGATGTTKWN_CAP_reprERF; FOXI1 (directAnnotation).
UBASH3Btaipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
UBASH3Btaipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
UBASH3Btransfac_pro__M04944GABPA (directAnnotation).
UBASH3Bhdpi__FLI1FLI1 (directAnnotation).
UBASH3Btaipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
UBASH3Btaipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
UBASH3Btaipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
UBASH3Btaipale_tf_pairs__ETV2_FOXI1_RSCGGATGTTKW_CAPETV2; FOXI1 (directAnnotation).
UBASH3Btaipale_tf_pairs__FLI1_FOXI1_RCCGGATGTTKWY_CAPFLI1; FOXI1 (directAnnotation).
UBASH3Bmetacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
UBASH3Btaipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
UBASH3Btaipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."