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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: UBAP1

Summary for UBAP1

Gene informationGene symbol

UBAP1

Ensembl ID

ENSG00000165006

Entrez ID

51271

Gene nameubiquitin associated protein 1
SynonymsUBAP
Gene typeprotein_coding
UniProtAcc

Q9NZ09


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Dataset with differentially expressed gene: UBAP1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes0.4554860.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.4484740.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.6812970.00e+00

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Expression of UBAP1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to UBAP1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating UBAP1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
UBAP1hsa-miR-4760-5p99.8049NM_001171204
UBAP1hsa-miR-806199.6313NM_001171204
UBAP1hsa-miR-7161-3p94.9203NM_001171204
UBAP1hsa-miR-10522-5p93.9521NM_001171201
UBAP1hsa-miR-376a-5p93.8013NM_001171204
UBAP1hsa-miR-548p91.4372NM_001171201
UBAP1hsa-miR-199b-5p91.1112NM_001171201
UBAP1hsa-miR-296-5p90.3349NM_001171204
UBAP1hsa-miR-6868-5p89.6793NM_001171201
UBAP1hsa-miR-7159-3p89.6253NM_001171204
UBAP1hsa-miR-4694-5p89.3467NM_001171201
UBAP1hsa-miR-5196-5p88.4202NM_001171204
UBAP1hsa-miR-4747-5p88.4202NM_001171204
UBAP1hsa-miR-548as-3p88.3185NM_001171201
UBAP1hsa-miR-501-5p88.1852NM_001171204
UBAP1hsa-miR-3121-5p88.0557NM_001171204
UBAP1hsa-miR-199a-5p87.9467NM_001171201
UBAP1hsa-miR-374c-5p87.4858NM_001171201
UBAP1hsa-miR-655-3p87.4858NM_001171201
UBAP1hsa-miR-6817-3p85.6405NM_001171204
UBAP1hsa-miR-391885.0211NM_001171201
UBAP1hsa-miR-369-3p81.1831NM_001171201
UBAP1hsa-miR-318581.1521NM_001171201
UBAP1hsa-miR-873-3p80.495NM_001171204
UBAP1hsa-miR-4766-3p80.4523NM_001171201
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Motifs and transcription factors (TFs) regulating UBAP1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
UBAP1metacluster_135.11NR2C2 (directAnnotation).
UBAP1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
UBAP1jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
UBAP1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
UBAP1kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
UBAP1transfac_pro__M02844BCL6B (inferredBy_Orthology).
UBAP1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
UBAP1kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
UBAP1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
UBAP1metacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
UBAP1kznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
UBAP1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
UBAP1metacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
UBAP1transfac_pro__M02786PLAGL1 (inferredBy_Orthology).
UBAP1transfac_pro__M01973PLAG1 (directAnnotation).
UBAP1transfac_pro__M01303SP1 (directAnnotation).
UBAP1metacluster_143.13ZBTB7A (directAnnotation).
UBAP1kznf__ZNF383_Imbeault2017_RP_RCADEZNF383 (directAnnotation).
UBAP1transfac_pro__M02898SMAD3 (directAnnotation).
UBAP1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
UBAP1taipale_tf_pairs__ETV5_TCF3_RNCGGAAGNNNNNCASSTGN_CAP_reprETV5; TCF3 (directAnnotation).
UBAP1jaspar__MA1522.1MAZ (directAnnotation).
UBAP1transfac_pro__M06362ZNF730 (directAnnotation).
UBAP1metacluster_34.3EGR1; ETS1; SETDB1; SIX5; SIX5; ZNF143; ZNF76 (directAnnotation).
UBAP1taipale_tf_pairs__TEAD4_CEBPD_RGWATGYNNTTRCGYAAN_CAPCEBPD; TEAD4 (directAnnotation).
UBAP1transfac_pro__M05845ZSCAN29 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."