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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: TXNRD1

Summary for TXNRD1

Gene informationGene symbol

TXNRD1

Ensembl ID

ENSG00000198431

Entrez ID

7296

Gene namethioredoxin reductase 1
SynonymsGRIM-12|Trxr1|TXNR
Gene typeprotein_coding
UniProtAcc

Q16881


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Dataset with differentially expressed gene: TXNRD1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-1.253215.68e-22

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.4326881.28e-35

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells-0.4834690.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.3867163.46e-26

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-1.896110.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-1.024650.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells0.6418050.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells0.612435.63e-31

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.943260.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-1.002050.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-1.618920.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.2956560.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells0.5420840.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells1.260360.00e+00

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Expression of TXNRD1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TXNRD1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TXNRD1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TXNRD1hsa-miR-453199.462NM_182743
TXNRD1hsa-miR-548ar-3p99.1701NM_001093771
TXNRD1hsa-miR-548e-3p98.8806NM_001093771
TXNRD1hsa-miR-548bc98.8806NM_001093771
TXNRD1hsa-miR-548az-3p98.8806NM_001093771
TXNRD1hsa-miR-548f-3p98.8806NM_001093771
TXNRD1hsa-miR-548a-3p98.8806NM_001093771
TXNRD1hsa-miR-5582-3p95.073NM_001093771
TXNRD1hsa-miR-4802-3p93.7471NM_182743
TXNRD1hsa-miR-4520-2-3p93.2198NM_182743
TXNRD1hsa-miR-95-5p92.4114NM_182743
TXNRD1hsa-miR-451691.3876NM_182743
TXNRD1hsa-miR-6796-5p91.1765NM_182743
TXNRD1hsa-miR-500a-5p90.7064NM_001093771
TXNRD1hsa-miR-444790.4143NM_182743
TXNRD1hsa-miR-5692a90.3346NM_182743
TXNRD1hsa-miR-23c88.7838NM_001093771
TXNRD1hsa-miR-23a-3p88.7838NM_001093771
TXNRD1hsa-miR-23b-3p88.7838NM_001093771
TXNRD1hsa-miR-570388.6769NM_182743
TXNRD1hsa-miR-443488.6769NM_182743
TXNRD1hsa-miR-6799-3p88.6435NM_001093771
TXNRD1hsa-miR-3173-5p88.6435NM_001093771
TXNRD1hsa-miR-5003-5p87.5787NM_182743
TXNRD1hsa-miR-42186.6912NM_182743
TXNRD1hsa-miR-124-5p86.027NM_182743
TXNRD1hsa-miR-368585.9619NM_001093771
TXNRD1hsa-miR-335-3p85.9556NM_182743
TXNRD1hsa-miR-4755-3p85.7111NM_182743
TXNRD1hsa-miR-6752-3p85.0505NM_001093771
TXNRD1hsa-miR-590-3p84.98NM_182743
TXNRD1hsa-miR-613483.6243NM_001093771
TXNRD1hsa-miR-447282.0472NM_182743
TXNRD1hsa-miR-4668-3p80.8486NM_001093771
TXNRD1hsa-miR-7-1-3p80.4523NM_001093771
TXNRD1hsa-miR-7-2-3p80.4523NM_001093771
TXNRD1hsa-miR-477580.406NM_182743
TXNRD1hsa-miR-497-3p80.293NM_001093771
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Motifs and transcription factors (TFs) regulating TXNRD1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TXNRD1taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
TXNRD1jaspar__MA1483.2ELF2 (directAnnotation).
TXNRD1kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
TXNRD1taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
TXNRD1metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
TXNRD1transfac_pro__M05298OVOL3 (directAnnotation).
TXNRD1metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
TXNRD1metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
TXNRD1taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
TXNRD1cisbp__M08198ELF1 (directAnnotation).
TXNRD1metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
TXNRD1swissregulon__hs__ELF2ELF2 (directAnnotation).
TXNRD1metacluster_34.1ZNF143; ZNF143; ZNF143; ZNF76; ZNF76; ZNF76 (directAnnotation).
TXNRD1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
TXNRD1metacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
TXNRD1transfac_pro__M04748GABPA (directAnnotation).
TXNRD1cisbp__M02645ETS1 (directAnnotation).
TXNRD1transfac_pro__M05817ZNF546 (directAnnotation).
TXNRD1taipale_tf_pairs__TFAP2C_MAX_TNSCCNNNGGSNNNCACGTGN_CAP_reprMAX; TFAP2C (directAnnotation).
TXNRD1metacluster_198.3ZFP64 (directAnnotation).
TXNRD1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
TXNRD1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
TXNRD1cisbp__M00788ZFY (inferredBy_Orthology).
TXNRD1kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
TXNRD1cisbp__M01863ZNF711 (inferredBy_Orthology).
TXNRD1metacluster_30.4BACH1; BACH1; MAFG; MAFG; NFE2; NFE2; NFE2L1; NFE2L1; NFE2L2 (directAnnotation).
TXNRD1metacluster_22.17NFE2 (directAnnotation).
TXNRD1transfac_pro__M05770ZNF77 (directAnnotation).
TXNRD1metacluster_22.37BACH1 (directAnnotation).
TXNRD1metacluster_22.11NFE2 (directAnnotation).
TXNRD1metacluster_22.13MAFK (inferredBy_Orthology).
TXNRD1metacluster_22.34BACH2 (directAnnotation).
TXNRD1metacluster_22.21NFE2L2 (inferredBy_Orthology).
TXNRD1transfac_pro__M01299MECP2 (directAnnotation).
TXNRD1taipale_tf_pairs__ETV2_HOXA2_NCCGGAAGTMATTA_CAP_reprETV2; HOXA2 (directAnnotation).
TXNRD1taipale_tf_pairs__ETV2_RFX5_NNNTTCCGSNNNNGCAACNN_CAP_reprETV2; RFX5 (directAnnotation).
TXNRD1taipale_tf_pairs__FLI1_FOXI1_GAAAACCGAAAN_CAP_reprFLI1; FOXI1 (directAnnotation).
TXNRD1metacluster_155.3PLAG1 (directAnnotation). PLAG1 (inferredBy_Orthology).
TXNRD1taipale_cyt_meth__ZBTB2_NTTTMCGGTWAN_eDBDZBTB2 (directAnnotation).
TXNRD1metacluster_19.1GMEB2; GMEB2; GMEB2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
TXNRD1"Arsenic trioxide"

DB01169

small molecule
TXNRD1"Flavin adenine dinucleotide"

DB03147

small molecule
TXNRD1"Fotemustine"

DB04106

small molecule
TXNRD1"Motexafin gadolinium"

DB05428

small molecule
TXNRD1"NADPH"

DB02338

small molecule
TXNRD1"PX-12"

DB05448

small molecule
TXNRD1"Spermidine"

DB03566

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."