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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: TUBB2A

Summary for TUBB2A

Gene informationGene symbol

TUBB2A

Ensembl ID

ENSG00000137267

Entrez ID

7280

Gene nametubulin beta 2A class IIa
SynonymsdJ40E16.7|TUBB|TUBB2
Gene typeprotein_coding
UniProtAcc

Q13885


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Dataset with differentially expressed gene: TUBB2A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.2884312.51e-02

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreErythrocytes0.3229097.53e-37

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.3803363.33e-12

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.4357680.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.6444790.00e+00

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Expression of TUBB2A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TUBB2A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TUBB2A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TUBB2Ahsa-miR-3663-3p97.093NM_001069
TUBB2Ahsa-miR-5004-5p94.7579NM_001069
TUBB2Ahsa-miR-29b-3p92.1553NM_001069
TUBB2Ahsa-miR-29a-3p92.1553NM_001069
TUBB2Ahsa-miR-29c-3p92.1553NM_001069
TUBB2Ahsa-miR-4709-5p89.3459NM_001069
TUBB2Ahsa-miR-464386.7425NM_001069
TUBB2Ahsa-miR-59185.6379NM_001069
TUBB2Ahsa-miR-767-5p85.0703NM_001069
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Motifs and transcription factors (TFs) regulating TUBB2A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TUBB2Ataipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
TUBB2Adbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
TUBB2Ataipale_tf_pairs__ELK1_HOXA3_RSCGGTAATKR_CAP_reprELK1; HOXA3 (directAnnotation).
TUBB2Ataipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
TUBB2Acisbp__M00808MYPOP (inferredBy_Orthology).
TUBB2Ataipale__YY2_DBD_NNCCGCCATNW_reprYY2 (directAnnotation).
TUBB2Atransfac_pro__M06259ZNF91 (directAnnotation).
TUBB2Ahomer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
TUBB2Ametacluster_141.9TAF1; YY1; YY1 (directAnnotation).
TUBB2Aswissregulon__mm__E2f7E2F7 (inferredBy_Orthology).
TUBB2Akznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
TUBB2Atransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
TUBB2Ataipale_tf_pairs__HOXB2_ETV1_ACCGGAAATGA_CAPETV1; HOXB2 (directAnnotation).
TUBB2Ataipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
TUBB2Atransfac_pro__M06108ZNF43 (directAnnotation).
TUBB2Atransfac_pro__M06408ZSCAN30 (directAnnotation).
TUBB2Ajaspar__MA1951.1FOS (directAnnotation).
TUBB2Ametacluster_44.9NKX2-2 (directAnnotation).
TUBB2Ataipale_tf_pairs__JUN_ATGACGTCAT_HTJUN (directAnnotation).
TUBB2Ametacluster_27.9ZSCAN31 (directAnnotation).
TUBB2Ametacluster_143.1ZSCAN31 (directAnnotation).
TUBB2Ajaspar__MA0604.1ATF1 (inferredBy_Orthology).
TUBB2Ametacluster_180.3ATF2; ATF2; ATF2; ATF2; ATF3; ATF3; ATF4; ATF4; ATF6; ATF6B; ATF7; ATF7; BACH2; BATF3; BATF3; CREB1; CREB1; CREB3; FOSL1; FOSL2; JDP2; JUN; JUN; JUN; JUND; JUND; XBP1; ZBTB21 (directAnnotation). JDP2; JDP2; JUND (inferredBy_Orthology).
TUBB2Atransfac_pro__M06799ZSCAN12 (directAnnotation).
TUBB2Ametacluster_111.5E4F1; E4F1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
TUBB2A"CYT997"

DB05147

small molecule
TUBB2A"Phenethyl Isothiocyanate"

DB12695

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."