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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TSC22D1

Summary for TSC22D1

Gene informationGene symbol

TSC22D1

Ensembl ID

ENSG00000102804

Entrez ID

8848

Gene nameTSC22 domain family member 1
SynonymsMGC17597|TGFB1I4|TSC22
Gene typeprotein_coding
UniProtAcc

Q15714


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Dataset with differentially expressed gene: TSC22D1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.210398.28e-10

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.3504881.07e-31

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.3927380.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-0.4808730.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.3980762.49e-03

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.3808941.57e-16

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreMalignant cells-0.3913820.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.3658843.92e-28

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.5664640.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.332340.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.2607981.95e-09

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.5767895.61e-45

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells1.094870.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.3349380.00e+00

GSE164897_Vem

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenibNAMalignant cells0.3164866.28e-42

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.4692210.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.3005010.00e+00

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Expression of TSC22D1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
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Significant ligand-receptor pairs related to TSC22D1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TSC22D1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TSC22D1hsa-let-7c-3p97.4792NM_001243797
TSC22D1hsa-miR-513c-3p97.2421NM_001243799
TSC22D1hsa-miR-513a-3p97.2421NM_001243799
TSC22D1hsa-miR-3606-3p97.0701NM_001243799
TSC22D1hsa-miR-471995.2178NM_183422
TSC22D1hsa-miR-4639-3p94.1713NM_183422
TSC22D1hsa-miR-552-3p93.9991NM_001243799
TSC22D1hsa-miR-130b-5p92.3372NM_001243797
TSC22D1hsa-miR-426792.012NM_001243797
TSC22D1hsa-miR-5002-3p91.996NM_001243799
TSC22D1hsa-miR-6852-3p91.7911NM_001243799
TSC22D1hsa-miR-390990.8281NM_001243799
TSC22D1hsa-miR-5582-5p89.8979NM_001243797
TSC22D1hsa-miR-200b-3p89.4836NM_001243797
TSC22D1hsa-miR-200c-3p89.4836NM_001243797
TSC22D1hsa-miR-42989.4836NM_001243797
TSC22D1hsa-miR-4714-3p89.4697NM_001243799
TSC22D1hsa-miR-542-3p89.3157NM_001243797
TSC22D1hsa-miR-428289.1087NM_001243799
TSC22D1hsa-miR-390888.5139NM_001243797
TSC22D1hsa-miR-444388.5121NM_001243797
TSC22D1hsa-miR-429187.4155NM_001243797
TSC22D1hsa-miR-515-5p86.6855NM_001243797
TSC22D1hsa-miR-6830-5p86.1075NM_001243799
TSC22D1hsa-miR-612485.0538NM_183422
TSC22D1hsa-miR-5010-3p84.3733NM_001243797
TSC22D1hsa-miR-561-5p84.3554NM_001243799
TSC22D1hsa-miR-59284.0688NM_001243797
TSC22D1hsa-miR-545-5p83.9217NM_001243799
TSC22D1hsa-miR-519e-5p83.713NM_001243797
TSC22D1hsa-miR-467282.9934NM_001243797
TSC22D1hsa-miR-7855-5p82.396NM_001243797
TSC22D1hsa-miR-488-3p81.5757NM_001243797
TSC22D1hsa-miR-875-3p81.0007NM_183422
TSC22D1hsa-miR-5571-5p80.6579NM_001243797
TSC22D1hsa-miR-427680.6307NM_001243799
TSC22D1hsa-miR-619-3p80.6025NM_001243799
TSC22D1hsa-miR-59980.5028NM_001243797
TSC22D1hsa-miR-6879-3p80.2363NM_001243797
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Motifs and transcription factors (TFs) regulating TSC22D1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TSC22D1metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
TSC22D1metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
TSC22D1metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
TSC22D1hdpi__ETV4ETV4 (directAnnotation).
TSC22D1taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
TSC22D1transfac_pro__M06156ZNF75D (directAnnotation).
TSC22D1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
TSC22D1taipale_tf_pairs__ETV5_EOMES_TNRCACCGGAWN_CAPEOMES; ETV5 (directAnnotation).
TSC22D1taipale_tf_pairs__FOXO1_ELK1_TGTTGCCGGANNN_CAPELK1; FOXO1 (directAnnotation).
TSC22D1taipale_tf_pairs__ELK1_HOXA3_RSCGGTAATKR_CAP_reprELK1; HOXA3 (directAnnotation).
TSC22D1taipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
TSC22D1cisbp__M00808MYPOP (inferredBy_Orthology).
TSC22D1taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
TSC22D1taipale_tf_pairs__HOXB2_ELF1_SMGGAAGTMRTTA_CAPELF1; HOXB2 (directAnnotation).
TSC22D1metacluster_198.7AHR; ZBTB14; ZBTB14; ZBTB14 (directAnnotation).
TSC22D1hdpi__TP73TP73 (directAnnotation).
TSC22D1taipale_tf_pairs__ERF_HES7_NCCGGAANNNNNNCACGYGNN_CAP_reprERF; HES7 (directAnnotation).
TSC22D1metacluster_19.7GMEB1; GMEB2 (inferredBy_Orthology).
TSC22D1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
TSC22D1taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
TSC22D1taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
TSC22D1kznf__ZNF25_Imbeault2017_OM_MEMEZNF25 (directAnnotation).
TSC22D1taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
TSC22D1kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
TSC22D1kznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
TSC22D1metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
TSC22D1metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
TSC22D1metacluster_3.14WT1; WT1 (directAnnotation).
TSC22D1swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
TSC22D1cisbp__M07938E2F1 (directAnnotation).
TSC22D1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
TSC22D1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
TSC22D1transfac_pro__M07397ZNF148 (directAnnotation).
TSC22D1metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
TSC22D1metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
TSC22D1taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
TSC22D1metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
TSC22D1metacluster_7.13ZFX (directAnnotation).
TSC22D1metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
TSC22D1homer__GGGGGGGG_MazMAZ (directAnnotation).
TSC22D1transfac_pro__M01175ZBTB7B (directAnnotation).
TSC22D1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
TSC22D1tfdimers__MD00151CHURC1 (directAnnotation).
TSC22D1metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
TSC22D1metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
TSC22D1transfac_pro__M01303SP1 (directAnnotation).
TSC22D1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
TSC22D1swissregulon__hs__CHD1CHD1 (directAnnotation).
TSC22D1transfac_pro__M02090E2F4 (directAnnotation).
TSC22D1transfac_pro__M01714KLF15 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."