DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: TRIM6

Summary for TRIM6

Gene informationGene symbol

TRIM6

Ensembl ID

ENSG00000121236

Entrez ID

117854

Gene nametripartite motif containing 6
SynonymsRNF89
Gene typeprotein_coding
UniProtAcc

Q9C030


Top

Dataset with differentially expressed gene: TRIM6

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.278151.61e-19

Top

Expression of TRIM6 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to TRIM6

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating TRIM6

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TRIM6hsa-miR-3529-3p97.6302NM_001198645
TRIM6hsa-miR-4774-5p93.7818NM_001198645
TRIM6hsa-miR-92192.0935NM_001198645
TRIM6hsa-miR-607391.3946NM_001198645
TRIM6hsa-miR-153989.4265NM_001198645
TRIM6hsa-miR-6761-5p87.8887NM_001198645
TRIM6hsa-miR-3065-5p87.8332NM_001198645
TRIM6hsa-miR-1-5p86.8778NM_001198645
TRIM6hsa-miR-98-3p85.0647NM_001198645
TRIM6hsa-let-7f-1-3p85.0647NM_001198645
TRIM6hsa-let-7b-3p85.0647NM_001198645
TRIM6hsa-let-7a-3p85.0647NM_001198645
TRIM6hsa-miR-452884.9926NM_001198645
TRIM6hsa-miR-612484.5906NM_001198645
TRIM6hsa-miR-6831-5p83.4678NM_001198645
TRIM6hsa-miR-366283.2125NM_001198645
TRIM6hsa-miR-196a-1-3p82.0239NM_001198645
TRIM6hsa-miR-3927-3p80.967NM_001198645
TRIM6hsa-miR-5009-3p80.6598NM_001198645
TRIM6hsa-miR-6809-3p80.517NM_001003818
Page: 1

Top

Motifs and transcription factors (TFs) regulating TRIM6

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TRIM6metacluster_7.13ZFX (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."