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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TRIM44

Summary for TRIM44

Gene informationGene symbol

TRIM44

Ensembl ID

ENSG00000166326

Entrez ID

54765

Gene nametripartite motif containing 44
SynonymsDIPB|MC7
Gene typeprotein_coding
UniProtAcc

Q96DX7


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Dataset with differentially expressed gene: TRIM44

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.303192.49e-14

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.2781971.30e-32

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3575348.62e-34

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Expression of TRIM44 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TRIM44

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TRIM44

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TRIM44hsa-miR-62399.7637NM_017583
TRIM44hsa-miR-6780b-3p99.1322NM_017583
TRIM44hsa-miR-478098.5718NM_017583
TRIM44hsa-miR-848598.3195NM_017583
TRIM44hsa-miR-211-5p93.8815NM_017583
TRIM44hsa-miR-204-5p93.8815NM_017583
TRIM44hsa-miR-4755-5p92.776NM_017583
TRIM44hsa-miR-5006-3p92.776NM_017583
TRIM44hsa-miR-445292.684NM_017583
TRIM44hsa-miR-144-3p90.8503NM_017583
TRIM44hsa-miR-120088.1822NM_017583
TRIM44hsa-miR-4680-3p87.521NM_017583
TRIM44hsa-miR-548an87.4263NM_017583
TRIM44hsa-miR-302f84.5543NM_017583
TRIM44hsa-miR-3692-3p84.0021NM_017583
TRIM44hsa-miR-3124-3p83.5408NM_017583
TRIM44hsa-miR-124882.855NM_017583
TRIM44hsa-miR-320182.5678NM_017583
TRIM44hsa-miR-324-3p82.4867NM_017583
TRIM44hsa-miR-3679-3p82.2791NM_017583
TRIM44hsa-miR-182-3p82.1603NM_017583
TRIM44hsa-miR-479182.1005NM_017583
TRIM44hsa-miR-1910-3p82.0499NM_017583
TRIM44hsa-miR-5692a81.7125NM_017583
TRIM44hsa-miR-5004-5p81.6394NM_017583
TRIM44hsa-miR-60781.3791NM_017583
TRIM44hsa-miR-397781.0618NM_017583
TRIM44hsa-miR-1287-5p80.8688NM_017583
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Motifs and transcription factors (TFs) regulating TRIM44

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TRIM44transfac_pro__M05788ZNF569 (inferredBy_Orthology).
TRIM44metacluster_52.11ZNF184 (directAnnotation).
TRIM44metacluster_135.11NR2C2 (directAnnotation).
TRIM44metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
TRIM44metacluster_144.3ZNF704; ZNF704 (directAnnotation).
TRIM44metacluster_7.13ZFX (directAnnotation).
TRIM44kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
TRIM44cisbp__M00968MTF2 (directAnnotation).
TRIM44metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
TRIM44metacluster_160.20JUND; PRDM15 (directAnnotation).
TRIM44metacluster_198.3ZFP64 (directAnnotation).
TRIM44metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
TRIM44metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
TRIM44metacluster_61.1DEAF1; DEAF1 (directAnnotation).
TRIM44cisbp__M00788ZFY (inferredBy_Orthology).
TRIM44kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
TRIM44metacluster_175.1ZNF283 (directAnnotation).
TRIM44metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
TRIM44metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
TRIM44transfac_pro__M01199TRIM28 (directAnnotation).
TRIM44metacluster_151.2ZNF23 (directAnnotation).
TRIM44transfac_pro__M03806ZBTB7C (directAnnotation).
TRIM44transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
TRIM44metacluster_144.8ZNF30; ZNF30 (directAnnotation).
TRIM44cisbp__M01863ZNF711 (inferredBy_Orthology).
TRIM44homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
TRIM44kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."