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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TRIM2

Summary for TRIM2

Gene informationGene symbol

TRIM2

Ensembl ID

ENSG00000109654

Entrez ID

23321

Gene nametripartite motif containing 2
SynonymsCMT2R|KIAA0517|RNF86
Gene typeprotein_coding
UniProtAcc

Q9C040


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Dataset with differentially expressed gene: TRIM2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.8763290.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3685050.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.9325480.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.4569680.00e+00

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Expression of TRIM2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TRIM2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TRIM2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TRIM2hsa-miR-5011-5p99.9938NM_015271
TRIM2hsa-miR-426299.7184NM_015271
TRIM2hsa-miR-181a-5p99.5029NM_015271
TRIM2hsa-miR-181b-5p99.5029NM_015271
TRIM2hsa-miR-181d-5p99.5029NM_015271
TRIM2hsa-miR-181c-5p99.5029NM_015271
TRIM2hsa-miR-469699.4794NM_015271
TRIM2hsa-miR-211398.7575NM_015271
TRIM2hsa-miR-5195-3p98.6335NM_015271
TRIM2hsa-miR-145-5p98.6335NM_015271
TRIM2hsa-miR-153-5p97.821NM_015271
TRIM2hsa-miR-128497.2929NM_015271
TRIM2hsa-miR-651-3p96.9733NM_015271
TRIM2hsa-miR-10527-5p96.8428NM_015271
TRIM2hsa-miR-190a-3p96.813NM_015271
TRIM2hsa-miR-7856-5p95.9221NM_015271
TRIM2hsa-miR-340-5p95.7156NM_015271
TRIM2hsa-miR-55995.2338NM_015271
TRIM2hsa-miR-548p95.0999NM_015271
TRIM2hsa-miR-330-3p95.069NM_015271
TRIM2hsa-miR-442295.0652NM_015271
TRIM2hsa-miR-313394.9755NM_015271
TRIM2hsa-miR-548y94.9457NM_015271
TRIM2hsa-miR-548ak94.9457NM_015271
TRIM2hsa-miR-548ab94.9457NM_015271
TRIM2hsa-miR-548w94.9457NM_015271
TRIM2hsa-miR-548au-5p94.9457NM_015271
TRIM2hsa-miR-548a-5p94.9457NM_015271
TRIM2hsa-miR-548ar-5p94.9457NM_015271
TRIM2hsa-miR-548am-5p94.9457NM_015271
TRIM2hsa-miR-548ad-5p94.9457NM_015271
TRIM2hsa-miR-548j-5p94.9457NM_015271
TRIM2hsa-miR-548i94.9457NM_015271
TRIM2hsa-miR-548h-5p94.9457NM_015271
TRIM2hsa-miR-548b-5p94.9457NM_015271
TRIM2hsa-miR-548ay-5p94.9457NM_015271
TRIM2hsa-miR-548d-5p94.9457NM_015271
TRIM2hsa-miR-548c-5p94.9457NM_015271
TRIM2hsa-miR-548ap-5p94.9457NM_015271
TRIM2hsa-miR-548ae-5p94.9457NM_015271
TRIM2hsa-miR-548bb-5p94.9457NM_015271
TRIM2hsa-miR-548aq-5p94.9457NM_015271
TRIM2hsa-miR-548as-5p94.9457NM_015271
TRIM2hsa-miR-548o-5p94.9457NM_015271
TRIM2hsa-miR-561-3p94.7301NM_015271
TRIM2hsa-miR-548aw93.9208NM_015271
TRIM2hsa-miR-3613-3p93.3266NM_015271
TRIM2hsa-miR-569692.5573NM_015271
TRIM2hsa-miR-6867-5p92.4245NM_015271
TRIM2hsa-miR-33a-3p91.4026NM_015271
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Motifs and transcription factors (TFs) regulating TRIM2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TRIM2metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
TRIM2taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
TRIM2taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
TRIM2dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
TRIM2taipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
TRIM2cisbp__M08198ELF1 (directAnnotation).
TRIM2metacluster_198.7AHR; ZBTB14; ZBTB14; ZBTB14 (directAnnotation).
TRIM2taipale_tf_pairs__ERF_HES7_NCCGGAANNNNNNCACGYGNN_CAP_reprERF; HES7 (directAnnotation).
TRIM2taipale_tf_pairs__ATF4_TEF_RNMTGATGCAATN_CAPATF4; TEF (directAnnotation).
TRIM2transfac_pro__M01299MECP2 (directAnnotation).
TRIM2metacluster_156.2ATF3; ATF4; ATF4; ATF4; ATF4; ATF4; ATF4; CEBPG; CEBPG; DDIT3; MYC (directAnnotation). ATF4; ATF4; ATF4; CEBPG; DDIT3 (inferredBy_Orthology).
TRIM2transfac_pro__M05788ZNF569 (inferredBy_Orthology).
TRIM2metacluster_52.11ZNF184 (directAnnotation).
TRIM2transfac_pro__M05976ZNF223 (directAnnotation).
TRIM2transfac_pro__M04913ZBTB7A (directAnnotation).
TRIM2taipale_tf_pairs__TEAD4_ETV1_RSCGGAAATRCM_CAPETV1; TEAD4 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."