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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TRAM2

Summary for TRAM2

Gene informationGene symbol

TRAM2

Ensembl ID

ENSG00000065308

Entrez ID

9697

Gene nametranslocation associated membrane protein 2
SynonymsKIAA0057
Gene typeprotein_coding
UniProtAcc

Q15035


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Dataset with differentially expressed gene: TRAM2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.6099460.00e+00

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Expression of TRAM2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TRAM2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TRAM2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TRAM2hsa-miR-133b97.696NM_012288
TRAM2hsa-miR-133a-3p97.696NM_012288
TRAM2hsa-miR-6832-3p95.0095NM_012288
TRAM2hsa-miR-6887-3p94.8699NM_012288
TRAM2hsa-miR-580-3p91.4115NM_012288
TRAM2hsa-miR-3065-3p90.2409NM_012288
TRAM2hsa-miR-132488.6567NM_012288
TRAM2hsa-miR-465688.5873NM_012288
TRAM2hsa-miR-4772-3p87.9487NM_012288
TRAM2hsa-miR-7111-5p87.8251NM_012288
TRAM2hsa-miR-5004-5p87.6153NM_012288
TRAM2hsa-miR-4747-5p86.9459NM_012288
TRAM2hsa-miR-193b-5p86.2479NM_012288
TRAM2hsa-miR-4723-5p86.245NM_012288
TRAM2hsa-miR-569886.245NM_012288
TRAM2hsa-miR-6870-5p86.245NM_012288
TRAM2hsa-miR-5196-5p85.9565NM_012288
TRAM2hsa-miR-449285.5671NM_012288
TRAM2hsa-miR-124-3p85.3451NM_012288
TRAM2hsa-miR-506-3p85.3451NM_012288
TRAM2hsa-miR-653-5p85.1669NM_012288
TRAM2hsa-miR-548g-3p84.6741NM_012288
TRAM2hsa-miR-5001-3p84.3816NM_012288
TRAM2hsa-miR-3190-3p84.3063NM_012288
TRAM2hsa-miR-205-3p84.0748NM_012288
TRAM2hsa-miR-442283.0692NM_012288
TRAM2hsa-miR-548c-3p82.6775NM_012288
TRAM2hsa-miR-6878-5p81.9446NM_012288
TRAM2hsa-miR-429881.8266NM_012288
TRAM2hsa-miR-548ar-3p81.7575NM_012288
TRAM2hsa-miR-6738-3p81.7423NM_012288
TRAM2hsa-miR-676-5p80.8001NM_012288
TRAM2hsa-miR-7111-3p80.7533NM_012288
TRAM2hsa-miR-6847-5p80.6136NM_012288
TRAM2hsa-miR-4731-5p80.1193NM_012288
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Motifs and transcription factors (TFs) regulating TRAM2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TRAM2metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
TRAM2metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
TRAM2metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
TRAM2taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
TRAM2metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
TRAM2hdpi__ETV4ETV4 (directAnnotation).
TRAM2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
TRAM2taipale_tf_pairs__FOXO1_ETV1_RCCGGAWGTKKN_CAPETV1; FOXO1 (directAnnotation).
TRAM2metacluster_182.10ZFX (directAnnotation).
TRAM2taipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."