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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TRAF3

Summary for TRAF3

Gene informationGene symbol

TRAF3

Ensembl ID

ENSG00000131323

Entrez ID

7187

Gene nameTNF receptor associated factor 3
SynonymsCAP-1|CD40bp|CRAF1|LAP1|RNF118
Gene typeprotein_coding
UniProtAcc

Q13114


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Dataset with differentially expressed gene: TRAF3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.3177240.00e+00

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Expression of TRAF3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TRAF3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TRAF3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TRAF3hsa-miR-6867-5p99.9281NM_001199427
TRAF3hsa-miR-469298.632NM_001199427
TRAF3hsa-miR-451498.6243NM_001199427
TRAF3hsa-miR-570-3p97.5287NM_001199427
TRAF3hsa-miR-708-3p96.5432NM_001199427
TRAF3hsa-miR-361-3p95.7696NM_001199427
TRAF3hsa-miR-513b-5p95.6829NM_001199427
TRAF3hsa-miR-366295.2012NM_001199427
TRAF3hsa-miR-29a-3p94.7531NM_001199427
TRAF3hsa-miR-29c-3p94.7531NM_001199427
TRAF3hsa-miR-29b-3p94.7531NM_001199427
TRAF3hsa-miR-6871-3p94.4316NM_001199427
TRAF3hsa-miR-125b-2-3p93.785NM_001199427
TRAF3hsa-miR-770393.6358NM_001199427
TRAF3hsa-miR-4722-5p93.4922NM_001199427
TRAF3hsa-miR-1910-3p93.373NM_001199427
TRAF3hsa-miR-366093.0558NM_001199427
TRAF3hsa-miR-452693.0558NM_001199427
TRAF3hsa-miR-486-3p92.5101NM_001199427
TRAF3hsa-miR-364692.1532NM_001199427
TRAF3hsa-miR-7161-3p92.1031NM_001199427
TRAF3hsa-miR-196a-1-3p91.9907NM_001199427
TRAF3hsa-miR-684491.612NM_001199427
TRAF3hsa-miR-3614-5p91.2562NM_001199427
TRAF3hsa-miR-155-5p91.1877NM_001199427
TRAF3hsa-miR-6875-3p91.0658NM_001199427
TRAF3hsa-miR-3059-5p91.0158NM_001199427
TRAF3hsa-miR-6511a-5p90.9973NM_001199427
TRAF3hsa-miR-7160-3p90.6027NM_001199427
TRAF3hsa-miR-75990.211NM_001199427
TRAF3hsa-miR-4694-5p90.1988NM_001199427
TRAF3hsa-miR-1269a89.7733NM_001199427
TRAF3hsa-miR-1269b89.7733NM_001199427
TRAF3hsa-miR-471989.4632NM_001199427
TRAF3hsa-miR-445789.4005NM_001199427
TRAF3hsa-miR-2115-3p89.3104NM_001199427
TRAF3hsa-miR-9-5p88.6478NM_001199427
TRAF3hsa-miR-453188.4456NM_001199427
TRAF3hsa-miR-3145-3p88.1742NM_001199427
TRAF3hsa-miR-6516-5p88.1271NM_001199427
TRAF3hsa-miR-28-3p88.0945NM_001199427
TRAF3hsa-miR-5587-5p87.5488NM_001199427
TRAF3hsa-miR-367487.5434NM_001199427
TRAF3hsa-miR-1245b-5p86.7267NM_001199427
TRAF3hsa-miR-314286.7267NM_001199427
TRAF3hsa-miR-4768-3p86.2988NM_001199427
TRAF3hsa-miR-6880-5p86.1719NM_001199427
TRAF3hsa-miR-6861-3p86.1583NM_001199427
TRAF3hsa-miR-5197-3p86.0803NM_001199427
TRAF3hsa-miR-3663-3p85.8496NM_001199427
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Motifs and transcription factors (TFs) regulating TRAF3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TRAF3metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
TRAF3transfac_pro__M04950EGR1 (directAnnotation).
TRAF3taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
TRAF3taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
TRAF3transfac_pro__M00652NRF1 (directAnnotation).
TRAF3taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
TRAF3transfac_pro__M04866HDAC2 (directAnnotation).
TRAF3jaspar__MA1122.1TFDP1 (directAnnotation).
TRAF3swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."