DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: TMEM50B

Summary for TMEM50B

Gene informationGene symbol

TMEM50B

Ensembl ID

ENSG00000263160

Entrez ID

757

Gene nametransmembrane protein 50B
SynonymsC21orf4
Gene typeprotein_coding
UniProtAcc

P56557


Top

Dataset with differentially expressed gene: TMEM50B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.753563.01e-04

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.5401380.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3089792.50e-39

Top

Expression of TMEM50B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to TMEM50B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating TMEM50B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TMEM50Bhsa-miR-4777-5p94.8721NM_006134
TMEM50Bhsa-miR-3664-3p94.7652NM_006134
TMEM50Bhsa-miR-4436b-5p93.8527NM_006134
TMEM50Bhsa-miR-24-3p93.0442NM_006134
TMEM50Bhsa-miR-182-5p91.8382NM_006134
TMEM50Bhsa-miR-316491.6667NM_006134
TMEM50Bhsa-miR-6820-3p91.6667NM_006134
TMEM50Bhsa-miR-519a-3p91.5014NM_006134
TMEM50Bhsa-miR-519b-3p91.5014NM_006134
TMEM50Bhsa-miR-519c-3p91.5014NM_006134
TMEM50Bhsa-miR-128391.4553NM_006134
TMEM50Bhsa-miR-452889.7082NM_006134
TMEM50Bhsa-miR-426188.6267NM_006134
TMEM50Bhsa-miR-6761-5p88.0952NM_006134
TMEM50Bhsa-miR-371a-5p87.9932NM_006134
TMEM50Bhsa-miR-147b-5p86.2352NM_006134
TMEM50Bhsa-miR-190a-3p84.2367NM_006134
TMEM50Bhsa-miR-454-3p83.9025NM_006134
TMEM50Bhsa-miR-570483.2716NM_006134
TMEM50Bhsa-miR-429582.415NM_006134
TMEM50Bhsa-miR-130b-3p82.415NM_006134
TMEM50Bhsa-miR-366682.415NM_006134
TMEM50Bhsa-miR-301a-3p82.415NM_006134
TMEM50Bhsa-miR-301b-3p82.415NM_006134
TMEM50Bhsa-miR-130a-3p82.415NM_006134
TMEM50Bhsa-miR-3682-5p81.8576NM_006134
TMEM50Bhsa-miR-106a-3p81.8409NM_006134
TMEM50Bhsa-miR-7111-3p80.2513NM_006134
Page: 1

Top

Motifs and transcription factors (TFs) regulating TMEM50B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TMEM50Bmetacluster_7.13ZFX (directAnnotation).
TMEM50Bmetacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
TMEM50Bcisbp__M01863ZNF711 (inferredBy_Orthology).
TMEM50Btaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
TMEM50Bmetacluster_151.2ZNF23 (directAnnotation).
TMEM50Bmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
TMEM50Bkznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
TMEM50Bmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
TMEM50Btransfac_pro__M06071ZNF814 (directAnnotation).
TMEM50Bhomer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
TMEM50Bmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
TMEM50Bjaspar__MA0079.5SP1 (directAnnotation).
TMEM50Bmetacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
TMEM50Bkznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
TMEM50Btransfac_pro__M05788ZNF569 (inferredBy_Orthology).
TMEM50Bmetacluster_52.11ZNF184 (directAnnotation).
TMEM50Bkznf__ZNF25_Imbeault2017_OM_MEMEZNF25 (directAnnotation).
TMEM50Bkznf__ZNF594_Schmitges2016_RCADEZNF594 (directAnnotation).
TMEM50Bkznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
TMEM50Btransfac_pro__M04617ZBTB7A (directAnnotation).
TMEM50Bmetacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
TMEM50Btaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
TMEM50Btaipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
TMEM50Btransfac_pro__M07387ZBTB7A (directAnnotation).
TMEM50Btransfac_pro__M07436WT1 (directAnnotation).
TMEM50Btransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
TMEM50Btransfac_pro__M00716ZBTB14 (directAnnotation).
TMEM50Bswissregulon__hs__CHD1CHD1 (directAnnotation).
TMEM50Bhdpi__HIP2UBE2K (directAnnotation).
TMEM50Btransfac_pro__M04893TAF1 (directAnnotation).
TMEM50Btransfac_pro__M03876ZBTB33 (directAnnotation).
TMEM50Bmetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
TMEM50Bmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
TMEM50Bkznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
TMEM50Btransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
TMEM50Bmetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."