DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: TMEM30A

Summary for TMEM30A

Gene informationGene symbol

TMEM30A

Ensembl ID

ENSG00000112697

Entrez ID

55754

Gene nametransmembrane protein 30A
SynonymsC6orf67|CDC50A|FLJ10856
Gene typeprotein_coding
UniProtAcc

Q9NV96


Top

Dataset with differentially expressed gene: TMEM30A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.2797731.93e-08

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprepDCs0.4250497.48e-04

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.9768950.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.3098940.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3636243.61e-18

Top

Expression of TMEM30A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to TMEM30A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating TMEM30A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TMEM30Ahsa-miR-450398.8339NM_001143958
TMEM30Ahsa-miR-469897.4326NM_001143958
TMEM30Ahsa-miR-6792-5p96.7676NM_001143958
TMEM30Ahsa-miR-806393.7429NM_001143958
TMEM30Ahsa-miR-1212491.1551NM_001143958
TMEM30Ahsa-miR-477591.1417NM_001143958
TMEM30Ahsa-miR-463790.816NM_001143958
TMEM30Ahsa-miR-3681-3p90.0197NM_001143958
TMEM30Ahsa-miR-464389.8261NM_001143958
TMEM30Ahsa-miR-128-3p89.3081NM_001143958
TMEM30Ahsa-miR-216a-3p89.3081NM_001143958
TMEM30Ahsa-miR-548l88.3709NM_001143958
TMEM30Ahsa-miR-4711-5p88.1369NM_001143958
TMEM30Ahsa-miR-7112-3p88.1369NM_001143958
TMEM30Ahsa-miR-3145-5p87.9255NM_001143958
TMEM30Ahsa-miR-612886.7949NM_001143958
TMEM30Ahsa-miR-124386.5316NM_001143958
TMEM30Ahsa-miR-5007-3p86.344NM_001143958
TMEM30Ahsa-miR-548p85.4407NM_001143958
TMEM30Ahsa-miR-10527-5p85.0439NM_001143958
TMEM30Ahsa-miR-447383.8306NM_001143958
TMEM30Ahsa-miR-153-5p83.7567NM_001143958
TMEM30Ahsa-miR-182783.707NM_001143958
TMEM30Ahsa-miR-196a-1-3p83.6979NM_001143958
TMEM30Ahsa-miR-431083.35NM_001143958
TMEM30Ahsa-miR-429183.2873NM_001143958
TMEM30Ahsa-miR-7157-5p82.8265NM_001143958
TMEM30Ahsa-miR-520d-5p82.7776NM_001143958
TMEM30Ahsa-miR-524-5p82.7776NM_001143958
TMEM30Ahsa-miR-807082.5668NM_001143958
TMEM30Ahsa-miR-4482-3p82.0358NM_001143958
TMEM30Ahsa-miR-2681-5p81.9389NM_001143958
TMEM30Ahsa-miR-5589-3p81.724NM_001143958
TMEM30Ahsa-miR-374b-3p81.6561NM_001143958
TMEM30Ahsa-miR-548e-5p81.5993NM_001143958
TMEM30Ahsa-miR-314881.5677NM_001143958
TMEM30Ahsa-miR-6730-5p80.7803NM_001143958
Page: 1

Top

Motifs and transcription factors (TFs) regulating TMEM30A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TMEM30Ataipale_tf_pairs__ATF4_TEF_RNMTGATGCAATN_CAPATF4; TEF (directAnnotation).
TMEM30Ataipale_tf_pairs__ATF4_CEBPD_NGATGATGCAATNN_CAPATF4; CEBPD (directAnnotation).
TMEM30Ajaspar__MA1933.1SREBF2 (directAnnotation).
TMEM30Ametacluster_156.2ATF3; ATF4; ATF4; ATF4; ATF4; ATF4; ATF4; CEBPG; CEBPG; DDIT3; MYC (directAnnotation). ATF4; ATF4; ATF4; CEBPG; DDIT3 (inferredBy_Orthology).
TMEM30Atransfac_pro__M06035ZNF749 (directAnnotation).
TMEM30Atransfac_pro__M01861ATF1 (directAnnotation).
TMEM30Ametacluster_160.20JUND; PRDM15 (directAnnotation).
TMEM30Ametacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
TMEM30Ametacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
TMEM30Ataipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
TMEM30Ametacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
TMEM30Ataipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
TMEM30Ahdpi__TP73TP73 (directAnnotation).
TMEM30Ametacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
TMEM30Ametacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
TMEM30Atransfac_pro__M04826EP300 (directAnnotation).
TMEM30Ataipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
TMEM30Ataipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
TMEM30Ahdpi__ETV4ETV4 (directAnnotation).
TMEM30Ametacluster_33.8BRCA1; CHD2; CHD2; ETS1; NR3C1; ZBED1; ZBED1; ZBED1; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33 (directAnnotation). CHD2; ZBTB33 (inferredBy_Orthology).
TMEM30Ataipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
TMEM30Ajaspar__MA1708.1ETV7 (directAnnotation).
TMEM30Ataipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
TMEM30Ametacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
TMEM30Ataipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
TMEM30Atransfac_pro__M06173ZNF85 (directAnnotation).
TMEM30Atransfac_pro__M01122ZNF219 (directAnnotation).
TMEM30Ataipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
TMEM30Ataipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
TMEM30Ametacluster_84.2RARA (directAnnotation).
TMEM30Ahomer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
TMEM30Ametacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
TMEM30Ametacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
TMEM30Ametacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
TMEM30Atransfac_pro__M05479ZNF580 (directAnnotation).
TMEM30Ametacluster_35.2EGR1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF3; ELF4; ELF4; ELK1; ELK3; ELK4; ERG; ETS1; ETS1; ETS2; ETV1; ETV1; ETV5; ETV5; ETV6; FLI1; FLI1; GABPA; GABPA; GABPA; GABPB1; GABPB1; GABPB1; ZBTB7A (directAnnotation). ELF2; ELF2; ERG; ERG; ETS2; FLI1; GABPA; IKZF3; SPIC (inferredBy_Orthology).
TMEM30Atfdimers__MD00151CHURC1 (directAnnotation).
TMEM30Ataipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
TMEM30Ametacluster_126.3LIN28B; LIN28B (directAnnotation).
TMEM30Ataipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
TMEM30Ametacluster_24.5ZNF675; ZNF675 (directAnnotation).
TMEM30Ametacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
TMEM30Atransfac_pro__M06126ZNF43 (directAnnotation).
TMEM30Atransfac_pro__M02090E2F4 (directAnnotation).
TMEM30Akznf__ZNF343_Imbeault2017_RP_RCADEZNF343 (directAnnotation).
TMEM30Ahdpi__HIP2UBE2K (directAnnotation).
TMEM30Ametacluster_197.3E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F5; E2F5; E2F5; E2F5; E2F6; E2F7; E2F7; E2F7; RB1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP2; TFDP2 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."