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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TMEM19

Summary for TMEM19

Gene informationGene symbol

TMEM19

Ensembl ID

ENSG00000139291

Entrez ID

55266

Gene nametransmembrane protein 19
SynonymsFLJ10936
Gene typeprotein_coding
UniProtAcc

Q96HH6


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Dataset with differentially expressed gene: TMEM19

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreMalignant cells0.2929441.86e-16

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.3400170.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.2840080.00e+00

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Expression of TMEM19 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TMEM19

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TMEM19

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TMEM19hsa-miR-314896.1722NM_018279
TMEM19hsa-miR-391693.7226NM_018279
TMEM19hsa-miR-312593.7226NM_018279
TMEM19hsa-miR-6859-5p92.3091NM_018279
TMEM19hsa-miR-6885-3p92.1854NM_018279
TMEM19hsa-miR-582-5p91.7347NM_018279
TMEM19hsa-miR-494-3p90.0728NM_018279
TMEM19hsa-miR-3613-3p89.0608NM_018279
TMEM19hsa-miR-429487.3379NM_018279
TMEM19hsa-miR-197-3p86.5466NM_018279
TMEM19hsa-miR-146b-5p86.1046NM_018279
TMEM19hsa-miR-146a-5p86.1046NM_018279
TMEM19hsa-miR-7153-5p86.1046NM_018279
TMEM19hsa-miR-4795-3p86.0883NM_018279
TMEM19hsa-miR-34b-5p85.5904NM_018279
TMEM19hsa-miR-449c-5p85.5904NM_018279
TMEM19hsa-miR-568882.8537NM_018279
TMEM19hsa-miR-495-3p82.5631NM_018279
TMEM19hsa-miR-130b-5p81.939NM_018279
TMEM19hsa-miR-520f-3p81.1337NM_018279
TMEM19hsa-miR-2682-5p80.7028NM_018279
TMEM19hsa-miR-4776-3p80.3568NM_018279
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Motifs and transcription factors (TFs) regulating TMEM19

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TMEM19taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
TMEM19taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
TMEM19kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
TMEM19metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
TMEM19metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
TMEM19transfac_pro__M04950EGR1 (directAnnotation).
TMEM19taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
TMEM19transfac_pro__M00652NRF1 (directAnnotation).
TMEM19hdpi__ETV4ETV4 (directAnnotation).
TMEM19transfac_pro__M04866HDAC2 (directAnnotation).
TMEM19jaspar__MA1122.1TFDP1 (directAnnotation).
TMEM19metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
TMEM19taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_reprZNF385D (directAnnotation).
TMEM19transfac_pro__M01298MECP2 (directAnnotation).
TMEM19hocomoco__GSC2_HUMAN.H11MO.0.DGSC2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."