DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: TM2D3

Summary for TM2D3

Gene informationGene symbol

TM2D3

Ensembl ID

ENSG00000184277

Entrez ID

80213

Gene nameTM2 domain containing 3
SynonymsBLP2|FLJ22604
Gene typeprotein_coding
UniProtAcc

NA


Top

Dataset with differentially expressed gene: TM2D3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.5118130.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4915850.00e+00

Top

Expression of TM2D3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to TM2D3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating TM2D3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TM2D3hsa-miR-471897.4225NM_078474
TM2D3hsa-miR-4742-5p94.0113NM_078474
TM2D3hsa-miR-129792.9731NM_001307960
TM2D3hsa-miR-17-3p92.8733NM_078474
TM2D3hsa-miR-6804-5p92.7918NM_001307960
TM2D3hsa-miR-4778-3p92.099NM_001307960
TM2D3hsa-miR-449892.0683NM_078474
TM2D3hsa-miR-512-3p91.2759NM_001307960
TM2D3hsa-miR-548aj-3p90.3464NM_078474
TM2D3hsa-miR-548x-3p90.3464NM_078474
TM2D3hsa-miR-449289.8282NM_078474
TM2D3hsa-miR-26a-5p89.3277NM_001307960
TM2D3hsa-miR-26b-5p89.3277NM_001307960
TM2D3hsa-miR-4999-5p87.4382NM_078474
TM2D3hsa-miR-548ac86.6168NM_078474
TM2D3hsa-miR-548d-3p86.6168NM_078474
TM2D3hsa-miR-548j-3p86.6168NM_078474
TM2D3hsa-miR-548h-3p86.6168NM_078474
TM2D3hsa-miR-548ae-3p86.6168NM_078474
TM2D3hsa-miR-548aq-3p86.6168NM_078474
TM2D3hsa-miR-548ah-3p86.6168NM_078474
TM2D3hsa-miR-548am-3p86.6168NM_078474
TM2D3hsa-miR-548bb-3p86.6168NM_078474
TM2D3hsa-miR-548z86.6168NM_078474
TM2D3hsa-miR-1537-5p86.6053NM_078474
TM2D3hsa-miR-76285.9109NM_078474
TM2D3hsa-miR-5001-5p85.9109NM_078474
TM2D3hsa-miR-446584.0331NM_001307960
TM2D3hsa-miR-477583.7694NM_078474
TM2D3hsa-miR-449382.4504NM_001307960
TM2D3hsa-miR-3922-5p81.3992NM_078474
TM2D3hsa-miR-502-5p80.7885NM_001307960
TM2D3hsa-miR-3691-5p80.4136NM_001307960
Page: 1

Top

Motifs and transcription factors (TFs) regulating TM2D3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TM2D3metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
TM2D3taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
TM2D3cisbp__M08198ELF1 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."