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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: THUMPD1

Summary for THUMPD1

Gene informationGene symbol

THUMPD1

Ensembl ID

ENSG00000066654

Entrez ID

55623

Gene nameTHUMP domain containing 1
SynonymsFLJ20274|Tan1
Gene typeprotein_coding
UniProtAcc

Q9NXG2


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Dataset with differentially expressed gene: THUMPD1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.4241082.56e-34

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4008434.77e-33

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Expression of THUMPD1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to THUMPD1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating THUMPD1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
THUMPD1hsa-miR-3124-3p98.0048NM_001304550
THUMPD1hsa-miR-153-5p93.0303NM_017736
THUMPD1hsa-miR-314393.0283NM_001304550
THUMPD1hsa-miR-548az-3p92.6693NM_017736
THUMPD1hsa-miR-548f-3p92.6693NM_017736
THUMPD1hsa-miR-548e-3p92.6693NM_017736
THUMPD1hsa-miR-548a-3p92.6693NM_017736
THUMPD1hsa-miR-548bc92.6693NM_017736
THUMPD1hsa-miR-548ar-3p92.6561NM_017736
THUMPD1hsa-miR-873-5p92.2948NM_001304550
THUMPD1hsa-miR-120092.0082NM_001304550
THUMPD1hsa-miR-54391.6537NM_017736
THUMPD1hsa-miR-4697-3p91.3483NM_001304550
THUMPD1hsa-miR-361-5p91.2943NM_001304550
THUMPD1hsa-miR-429789.8172NM_001304550
THUMPD1hsa-miR-391989.7236NM_001304550
THUMPD1hsa-miR-501-5p88.5076NM_001304550
THUMPD1hsa-miR-9983-3p87.9922NM_017736
THUMPD1hsa-miR-129-5p87.8838NM_017736
THUMPD1hsa-miR-797486.4131NM_001304550
THUMPD1hsa-miR-4756-3p85.7716NM_001304550
THUMPD1hsa-miR-848585.2969NM_017736
THUMPD1hsa-miR-3160-5p84.8305NM_017736
THUMPD1hsa-miR-4799-5p84.6463NM_001304550
THUMPD1hsa-miR-138-1-3p84.6462NM_017736
THUMPD1hsa-miR-6750-5p84.5478NM_001304550
THUMPD1hsa-miR-6822-5p84.5478NM_001304550
THUMPD1hsa-miR-1212283.7929NM_001304550
THUMPD1hsa-miR-432-5p83.7792NM_001304550
THUMPD1hsa-miR-3680-3p83.6801NM_001304550
THUMPD1hsa-miR-580-3p83.3337NM_001304550
THUMPD1hsa-miR-548g-3p83.0836NM_017736
THUMPD1hsa-miR-472982.9992NM_001304550
THUMPD1hsa-miR-449c-3p82.4691NM_001304550
THUMPD1hsa-miR-394182.4402NM_017736
THUMPD1hsa-miR-5581-5p81.6542NM_001304550
THUMPD1hsa-miR-6881-3p80.8425NM_001304550
THUMPD1hsa-miR-5582-3p80.7076NM_017736
THUMPD1hsa-miR-806380.5666NM_001304550
THUMPD1hsa-miR-5003-3p80.4373NM_001304550
THUMPD1hsa-miR-548p80.3533NM_001304550
Page: 1

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Motifs and transcription factors (TFs) regulating THUMPD1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
THUMPD1metacluster_144.8ZNF30; ZNF30 (directAnnotation).
Page: 1

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."