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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TGOLN2

Summary for TGOLN2

Gene informationGene symbol

TGOLN2

Ensembl ID

ENSG00000152291

Entrez ID

10618

Gene nametrans-golgi network protein 2
SynonymsTGN38|TGN46|TGN48|TGN51|TTGN2
Gene typeprotein_coding
UniProtAcc

O43493


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Dataset with differentially expressed gene: TGOLN2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.3000430.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.2604583.24e-41

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.295730.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.3001760.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.2534763.13e-24

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.2951871.61e-09

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.5783750.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.2604221.04e-23

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells0.268027.67e-06

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.5416761.14e-40

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.2846752.80e-45

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells0.4428460.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells0.6177220.00e+00

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Expression of TGOLN2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TGOLN2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TGOLN2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TGOLN2hsa-miR-320b94.9558NM_006464
TGOLN2hsa-miR-320d94.9558NM_006464
TGOLN2hsa-miR-320c94.9558NM_006464
TGOLN2hsa-miR-320a-3p94.9558NM_006464
TGOLN2hsa-miR-442994.9558NM_006464
TGOLN2hsa-miR-3622b-5p92.5258NM_001206841
TGOLN2hsa-miR-3619-5p90.7279NM_006464
TGOLN2hsa-miR-76189.1621NM_006464
TGOLN2hsa-miR-4709-3p88.5992NM_001206841
TGOLN2hsa-miR-214-3p87.8704NM_006464
TGOLN2hsa-miR-548q87.3429NM_001206841
TGOLN2hsa-miR-152-3p84.6773NM_006464
TGOLN2hsa-miR-148b-3p84.6773NM_006464
TGOLN2hsa-miR-148a-3p84.6773NM_006464
TGOLN2hsa-miR-314384.481NM_001206841
TGOLN2hsa-miR-4724-3p84.4567NM_001206841
TGOLN2hsa-miR-429184.3543NM_006464
TGOLN2hsa-miR-525-5p81.977NM_001206844
TGOLN2hsa-miR-520a-5p81.977NM_001206844
TGOLN2hsa-miR-338-3p81.9589NM_001206841
TGOLN2hsa-miR-302c-5p80.9201NM_001206841
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Motifs and transcription factors (TFs) regulating TGOLN2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TGOLN2jaspar__MA1483.2ELF2 (directAnnotation).
TGOLN2hdpi__ETV4ETV4 (directAnnotation).
TGOLN2transfac_pro__M04826EP300 (directAnnotation).
TGOLN2metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
TGOLN2metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
TGOLN2transfac_pro__M02090E2F4 (directAnnotation).
TGOLN2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
TGOLN2cisbp__M07938E2F1 (directAnnotation).
TGOLN2homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
TGOLN2metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
TGOLN2taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
TGOLN2dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
TGOLN2metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
TGOLN2taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
TGOLN2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
TGOLN2cisbp__M08198ELF1 (directAnnotation).
TGOLN2transfac_pro__M00652NRF1 (directAnnotation).
TGOLN2taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
TGOLN2transfac_pro__M04866HDAC2 (directAnnotation).
TGOLN2jaspar__MA1122.1TFDP1 (directAnnotation).
TGOLN2metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
TGOLN2swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
TGOLN2metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
TGOLN2transfac_pro__M01783SP2 (directAnnotation).
TGOLN2metacluster_111.3ATF1; ATF3; CREB1; CREB1; CREB1; CREB1; CREB1; CREM; CREM; CREM; CREM; E4F1; E4F1 (directAnnotation). CREB1; CREB1; CREM; JDP2 (inferredBy_Orthology).
TGOLN2taipale_tf_pairs__ERF_PITX1_NSCGGANNNNNNGGMTTA_CAPERF; PITX1 (directAnnotation).
TGOLN2hdpi__HIP2UBE2K (directAnnotation).
TGOLN2transfac_pro__M02913SP140 (inferredBy_Orthology).
TGOLN2hdpi__TIMELESSTIMELESS (directAnnotation).
TGOLN2transfac_pro__M04893TAF1 (directAnnotation).
TGOLN2transfac_pro__M00430E2F1 (directAnnotation).
TGOLN2transfac_pro__M01090SMAD9 (inferredBy_Orthology).
TGOLN2transfac_pro__M00938E2F1 (directAnnotation).
TGOLN2transfac_pro__M06404ZNF497 (directAnnotation).
TGOLN2kznf__KLF1_Barrera2016.2_PBMKLF1 (directAnnotation).
TGOLN2taipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
TGOLN2hdpi__TP73TP73 (directAnnotation).
TGOLN2taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
TGOLN2taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
TGOLN2cisbp__M02645ETS1 (directAnnotation).
TGOLN2hdpi__FLI1FLI1 (directAnnotation).
TGOLN2taipale_tf_pairs__ETV2_CEBPD_RSCGGANNTTGCGYAAN_CAP_reprCEBPD; ETV2 (directAnnotation).
TGOLN2taipale_tf_pairs__ETV2_DRGX_RSCGGAWRYATTA_CAP_reprDRGX; ETV2 (directAnnotation).
TGOLN2transfac_pro__M01299MECP2 (directAnnotation).
TGOLN2transfac_pro__M05697ZNF235 (directAnnotation).
TGOLN2jaspar__MA1708.1ETV7 (directAnnotation).
TGOLN2metacluster_15.4SMAD6 (directAnnotation). SMAD6 (inferredBy_Orthology).
TGOLN2taipale_tf_pairs__GCM1_ETV7_NTNNNGGCGGAAGNNNTTCCNNN_CAP_reprETV7; GCM1 (directAnnotation).
TGOLN2taipale_tf_pairs__HOXB2_ELK1_TAATKRCCGGAAGNN_CAP_reprELK1; HOXB2 (directAnnotation).
TGOLN2jaspar__MA1933.1SREBF2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."