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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TBC1D30

Summary for TBC1D30

Gene informationGene symbol

TBC1D30

Ensembl ID

ENSG00000111490

Entrez ID

23329

Gene nameTBC1 domain family member 30
SynonymsKIAA0984
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: TBC1D30

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.4444760.00e+00

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Expression of TBC1D30 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TBC1D30

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TBC1D30

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TBC1D30hsa-miR-42198.1911NM_015279
TBC1D30hsa-miR-6507-5p93.6677NM_015279
TBC1D30hsa-miR-7110-5p92.06NM_015279
TBC1D30hsa-miR-6842-5p92.06NM_015279
TBC1D30hsa-miR-129791.9509NM_015279
TBC1D30hsa-miR-6751-5p91.3335NM_015279
TBC1D30hsa-miR-430690.995NM_015279
TBC1D30hsa-miR-548c-3p90.4775NM_015279
TBC1D30hsa-miR-6752-5p90.0069NM_015279
TBC1D30hsa-miR-6803-5p88.8518NM_015279
TBC1D30hsa-miR-708-3p88.6098NM_015279
TBC1D30hsa-miR-651-3p88.4902NM_015279
TBC1D30hsa-miR-7159-5p88.371NM_015279
TBC1D30hsa-miR-6800-3p87.8582NM_015279
TBC1D30hsa-miR-464486.8124NM_015279
TBC1D30hsa-miR-185-5p86.8124NM_015279
TBC1D30hsa-miR-323b-3p84.3443NM_015279
TBC1D30hsa-miR-320283.9775NM_015279
TBC1D30hsa-miR-66183.9381NM_015279
TBC1D30hsa-miR-26a-5p83.8426NM_015279
TBC1D30hsa-miR-26b-5p83.8426NM_015279
TBC1D30hsa-miR-1914-5p82.4633NM_015279
TBC1D30hsa-miR-127982.4296NM_015279
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Motifs and transcription factors (TFs) regulating TBC1D30

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TBC1D30taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
TBC1D30taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
TBC1D30kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
TBC1D30metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."