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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TBC1D23

Summary for TBC1D23

Gene informationGene symbol

TBC1D23

Ensembl ID

ENSG00000036054

Entrez ID

55773

Gene nameTBC1 domain family member 23
SynonymsFLJ11046
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: TBC1D23

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3797583.06e-42

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Expression of TBC1D23 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TBC1D23

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TBC1D23

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TBC1D23hsa-miR-548aa99.6534NM_001199198
TBC1D23hsa-miR-548t-3p99.6534NM_001199198
TBC1D23hsa-miR-548ap-3p99.6534NM_001199198
TBC1D23hsa-miR-30d-3p98.9623NM_001199198
TBC1D23hsa-miR-30a-3p98.9623NM_001199198
TBC1D23hsa-miR-30e-3p98.9623NM_001199198
TBC1D23hsa-miR-676-5p98.4853NM_018309
TBC1D23hsa-miR-365898.0749NM_018309
TBC1D23hsa-miR-374a-5p97.1964NM_018309
TBC1D23hsa-miR-374b-5p95.3237NM_018309
TBC1D23hsa-miR-7849-3p95.0676NM_018309
TBC1D23hsa-miR-6515-3p94.9646NM_001199198
TBC1D23hsa-miR-397394.4137NM_018309
TBC1D23hsa-miR-29894.0502NM_001199198
TBC1D23hsa-miR-6759-3p93.6497NM_001199198
TBC1D23hsa-miR-340-5p93.1214NM_001199198
TBC1D23hsa-miR-4699-3p92.3154NM_001199198
TBC1D23hsa-miR-551b-5p92.0781NM_001199198
TBC1D23hsa-miR-608388.5642NM_001199198
TBC1D23hsa-miR-477588.5303NM_001199198
TBC1D23hsa-miR-32-3p87.9147NM_001199198
TBC1D23hsa-miR-427687.6579NM_018309
TBC1D23hsa-miR-3177-5p87.1369NM_018309
TBC1D23hsa-miR-590-3p86.8285NM_018309
TBC1D23hsa-miR-6809-3p85.7191NM_001199198
TBC1D23hsa-miR-392085.0147NM_018309
TBC1D23hsa-miR-548as-3p84.6444NM_001199198
TBC1D23hsa-miR-369-3p82.7974NM_001199198
TBC1D23hsa-miR-129082.642NM_018309
TBC1D23hsa-miR-5197-3p82.3565NM_018309
TBC1D23hsa-miR-58781.9613NM_018309
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Motifs and transcription factors (TFs) regulating TBC1D23

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TBC1D23metacluster_160.20JUND; PRDM15 (directAnnotation).
TBC1D23metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
TBC1D23jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
TBC1D23kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."