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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TBC1D16

Summary for TBC1D16

Gene informationGene symbol

TBC1D16

Ensembl ID

ENSG00000167291

Entrez ID

125058

Gene nameTBC1 domain family member 16
SynonymsFLJ20748|MGC25062
Gene typeprotein_coding
UniProtAcc

Q8TBP0


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Dataset with differentially expressed gene: TBC1D16

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3019410.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.3442347.79e-24

GSE104987

MCF7 cell lineCell lineBreast cancerER+ breast cancerTargeted therapyKDM5-C70NAMalignant cells0.3223513.03e-13

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells0.3274182.80e-19

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.5062870.00e+00

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Expression of TBC1D16 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TBC1D16

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TBC1D16

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TBC1D16hsa-miR-6867-5p99.8973NM_001271844
TBC1D16hsa-miR-429299.162NM_001271844
TBC1D16hsa-miR-6791-5p99.162NM_001271844
TBC1D16hsa-miR-939-3p98.4543NM_001271845
TBC1D16hsa-miR-3194-5p96.8039NM_001271845
TBC1D16hsa-miR-578796.3013NM_001271845
TBC1D16hsa-miR-450596.2763NM_001271845
TBC1D16hsa-miR-6887-3p95.6516NM_001271845
TBC1D16hsa-miR-4649-3p94.1097NM_001271845
TBC1D16hsa-miR-7111-3p94.0971NM_001271845
TBC1D16hsa-miR-3059-5p93.6635NM_001271845
TBC1D16hsa-miR-6852-5p93.1906NM_001271845
TBC1D16hsa-miR-431993.1327NM_001271844
TBC1D16hsa-miR-4664-5p90.2185NM_001271845
TBC1D16hsa-miR-7113-5p89.9295NM_001271845
TBC1D16hsa-miR-6826-3p89.9024NM_001271845
TBC1D16hsa-miR-766-5p89.8911NM_001271845
TBC1D16hsa-miR-6810-3p89.7279NM_001271845
TBC1D16hsa-miR-18a-3p88.5932NM_001271845
TBC1D16hsa-miR-6734-3p88.5709NM_001271845
TBC1D16hsa-miR-2276-5p88.3887NM_001271845
TBC1D16hsa-miR-342-5p88.3603NM_001271845
TBC1D16hsa-miR-4520-2-3p87.7162NM_001271845
TBC1D16hsa-miR-3667-3p87.598NM_001271845
TBC1D16hsa-miR-6783-3p87.2437NM_001271845
TBC1D16hsa-miR-361-3p87.0599NM_001271845
TBC1D16hsa-miR-6842-3p87.0042NM_001271845
TBC1D16hsa-miR-426786.9858NM_001271844
TBC1D16hsa-miR-4520-3p86.9067NM_001271845
TBC1D16hsa-miR-1343-3p86.8364NM_001271845
TBC1D16hsa-miR-6801-3p86.7211NM_001271845
TBC1D16hsa-miR-2467-5p86.3557NM_001271844
TBC1D16hsa-miR-149-5p86.0004NM_001271844
TBC1D16hsa-miR-393585.8942NM_001271845
TBC1D16hsa-miR-4749-3p85.8436NM_001271845
TBC1D16hsa-miR-60885.4221NM_001271845
TBC1D16hsa-miR-465185.4221NM_001271845
TBC1D16hsa-miR-125a-5p85.209NM_001271844
TBC1D16hsa-miR-125b-5p85.209NM_001271844
TBC1D16hsa-miR-64784.7973NM_001271845
TBC1D16hsa-miR-204-3p84.7286NM_001271846
TBC1D16hsa-miR-4646-5p84.7286NM_001271846
TBC1D16hsa-miR-6804-5p84.1582NM_001271844
TBC1D16hsa-miR-7154-3p84.0461NM_001271845
TBC1D16hsa-miR-324-3p83.9166NM_001271845
TBC1D16hsa-miR-6742-3p83.8521NM_001271845
TBC1D16hsa-miR-6780a-3p83.498NM_001271845
TBC1D16hsa-miR-939-5p83.2675NM_001271845
TBC1D16hsa-miR-1343-5p83.2675NM_001271845
TBC1D16hsa-miR-6504-5p82.5051NM_001271844
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Motifs and transcription factors (TFs) regulating TBC1D16

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TBC1D16taipale_tf_pairs__ETV2_TEF_RSCGGAWNTTRCGYAAN_CAPETV2; TEF (directAnnotation).
TBC1D16swissregulon__hs__FUBP1FUBP1 (directAnnotation).
TBC1D16taipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
TBC1D16tfdimers__MD00456E2F6; OVOL2 (directAnnotation).
TBC1D16kznf__ZNF302_Imbeault2017_RP_RCADEZNF302 (directAnnotation).
TBC1D16metacluster_161.4LHX9 (directAnnotation).
TBC1D16kznf__ZNF737_Imbeault2017_OM_MEMEZNF737 (directAnnotation).
TBC1D16kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
TBC1D16hdpi__ETV4ETV4 (directAnnotation).
TBC1D16transfac_pro__M05628ZNF735 (directAnnotation).
TBC1D16metacluster_98.1ZNF524 (directAnnotation).
TBC1D16transfac_pro__M01253CNOT3 (directAnnotation).
TBC1D16hdpi__NFIXNFIX (directAnnotation).
TBC1D16transfac_pro__M02896SPI1 (inferredBy_Orthology).
TBC1D16transfac_pro__M05712ZNF134 (directAnnotation).
TBC1D16cisbp__M07938E2F1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."