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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SZRD1

Summary for SZRD1

Gene informationGene symbol

SZRD1

Ensembl ID

ENSG00000055070

Entrez ID

26099

Gene nameSUZ RNA binding domain containing 1
SynonymsC1orf144|DKFZp566C0424
Gene typeprotein_coding
UniProtAcc

Q7Z422


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Dataset with differentially expressed gene: SZRD1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells0.2926133.63e-11

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.3223918.16e-11

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.5901250.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4132291.01e-30

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.2660030.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.2685410.00e+00

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Expression of SZRD1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SZRD1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SZRD1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SZRD1hsa-miR-128-3p99.9505NM_001114600
SZRD1hsa-miR-216a-3p99.9505NM_001114600
SZRD1hsa-miR-3681-3p99.8759NM_001114600
SZRD1hsa-miR-152-3p98.3006NM_001114600
SZRD1hsa-miR-148b-3p98.3006NM_001114600
SZRD1hsa-miR-148a-3p98.3006NM_001114600
SZRD1hsa-miR-3620-3p97.7832NM_001114600
SZRD1hsa-miR-27b-3p96.0461NM_001114600
SZRD1hsa-miR-27a-3p96.0461NM_001114600
SZRD1hsa-miR-194-3p95.4946NM_001114600
SZRD1hsa-miR-4733-5p95.4058NM_001114600
SZRD1hsa-miR-998595.357NM_001114600
SZRD1hsa-miR-568895.28NM_001114600
SZRD1hsa-miR-495-3p95.28NM_001114600
SZRD1hsa-miR-6766-5p95.0617NM_001114600
SZRD1hsa-miR-6756-5p95.0617NM_001114600
SZRD1hsa-miR-6728-3p95.0335NM_001114600
SZRD1hsa-miR-5196-5p94.86NM_001114600
SZRD1hsa-miR-4747-5p94.86NM_001114600
SZRD1hsa-miR-532-3p92.624NM_001114600
SZRD1hsa-miR-891b91.5602NM_001114600
SZRD1hsa-miR-320291.1902NM_001114600
SZRD1hsa-miR-33a-3p90.8676NM_001114600
SZRD1hsa-miR-447890.4332NM_001114600
SZRD1hsa-miR-392990.4332NM_001114600
SZRD1hsa-miR-6870-5p90.3337NM_001114600
SZRD1hsa-miR-767-3p89.2173NM_001114600
SZRD1hsa-miR-4713-5p88.8624NM_001114600
SZRD1hsa-miR-317988.7073NM_001114600
SZRD1hsa-miR-494-3p88.2496NM_001114600
SZRD1hsa-miR-426787.8392NM_001114600
SZRD1hsa-miR-7111-5p87.4928NM_001114600
SZRD1hsa-miR-569886.9917NM_001114600
SZRD1hsa-miR-9851-5p86.4577NM_001114600
SZRD1hsa-miR-1226-3p86.1262NM_001114600
SZRD1hsa-miR-6510-5p86.0688NM_001114600
SZRD1hsa-miR-448685.6979NM_001114600
SZRD1hsa-miR-370-5p85.0865NM_001114600
SZRD1hsa-miR-4723-5p84.8842NM_001114600
SZRD1hsa-miR-454-3p84.8497NM_001114600
SZRD1hsa-miR-1212284.6795NM_001114600
SZRD1hsa-miR-2276-5p84.6294NM_001114600
SZRD1hsa-miR-204-5p84.4599NM_001114600
SZRD1hsa-miR-211-5p84.4599NM_001114600
SZRD1hsa-miR-150-5p84.3613NM_001114600
SZRD1hsa-miR-6511a-5p84.2402NM_001114600
SZRD1hsa-miR-6747-3p83.9968NM_001114600
SZRD1hsa-miR-2116-3p83.9624NM_001114600
SZRD1hsa-miR-427083.8958NM_001114600
SZRD1hsa-miR-465183.5831NM_001114600
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Motifs and transcription factors (TFs) regulating SZRD1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SZRD1metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
SZRD1metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
SZRD1taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
SZRD1dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
SZRD1jaspar__MA1483.2ELF2 (directAnnotation).
SZRD1metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
SZRD1taipale_tf_pairs__ETV2_HES7_NNCACGTGNNNNNCGGAWRY_CAP_reprETV2; HES7 (directAnnotation).
SZRD1taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
SZRD1taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
SZRD1cisbp__M08198ELF1 (directAnnotation).
SZRD1transfac_pro__M00652NRF1 (directAnnotation).
SZRD1hdpi__ETV4ETV4 (directAnnotation).
SZRD1taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
SZRD1transfac_pro__M04866HDAC2 (directAnnotation).
SZRD1metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
SZRD1swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
SZRD1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
SZRD1metacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
SZRD1taipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
SZRD1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
SZRD1jaspar__MA0748.2YY2 (directAnnotation).
SZRD1metacluster_198.3ZFP64 (directAnnotation).
SZRD1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
SZRD1cisbp__M00788ZFY (inferredBy_Orthology).
SZRD1kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
SZRD1metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
SZRD1taipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
SZRD1metacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
SZRD1swissregulon__hs__ELF2ELF2 (directAnnotation).
SZRD1taipale_tf_pairs__TEAD4_ETV4_RCCGGAAATRCC_CAPETV4; TEAD4 (directAnnotation).
SZRD1taipale_cyt_meth__ZBTB2_NTTTCCGGTAMN_eDBD_meth_reprZBTB2 (directAnnotation).
SZRD1taipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
SZRD1taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
SZRD1hdpi__FLI1FLI1 (directAnnotation).
SZRD1jaspar__MA1933.1SREBF2 (directAnnotation).
SZRD1taipale_tf_pairs__ERF_FOXI1_RSCGGATGTTKWN_CAP_reprERF; FOXI1 (directAnnotation).
SZRD1taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
SZRD1taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
SZRD1taipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
SZRD1taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
SZRD1taipale_tf_pairs__ETV2_FOXI1_RSCGGATGTTKW_CAPETV2; FOXI1 (directAnnotation).
SZRD1taipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
SZRD1taipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
SZRD1jaspar__MA1708.1ETV7 (directAnnotation).
SZRD1taipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_2ELK1; GCM1 (directAnnotation).
SZRD1taipale_tf_pairs__TEAD4_ETV1_RSCGGAAATRCM_CAPETV1; TEAD4 (directAnnotation).
SZRD1transfac_pro__M04748GABPA (directAnnotation).
SZRD1taipale_tf_pairs__ETV2_TEF_RSCGGAWNTTRCGYAAN_CAPETV2; TEF (directAnnotation).
SZRD1kznf__ZNF441_Imbeault2017_OM_RCADEZNF441 (directAnnotation).
SZRD1cisbp__M02645ETS1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."