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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SYCP2

Summary for SYCP2

Gene informationGene symbol

SYCP2

Ensembl ID

ENSG00000196074

Entrez ID

10388

Gene namesynaptonemal complex protein 2
SynonymsSCP2
Gene typeprotein_coding
UniProtAcc

Q9BX26


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Dataset with differentially expressed gene: SYCP2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-1.075970.00e+00

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Expression of SYCP2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SYCP2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SYCP2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SYCP2hsa-miR-153-5p94.6031NM_014258
SYCP2hsa-miR-519d-5p94.51NM_014258
SYCP2hsa-miR-445293.1731NM_014258
SYCP2hsa-miR-208a-5p92.4362NM_014258
SYCP2hsa-miR-208b-5p92.4362NM_014258
SYCP2hsa-miR-548n89.481NM_014258
SYCP2hsa-miR-6870-3p88.7485NM_014258
SYCP2hsa-miR-183-3p88.3071NM_014258
SYCP2hsa-miR-580-5p87.1929NM_014258
SYCP2hsa-miR-28-3p86.9135NM_014258
SYCP2hsa-miR-337-3p86.2792NM_014258
SYCP2hsa-miR-15a-3p85.0808NM_014258
SYCP2hsa-miR-570484.3606NM_014258
SYCP2hsa-miR-57783.3577NM_014258
SYCP2hsa-miR-670-3p83.1131NM_014258
SYCP2hsa-miR-6892-3p83.1061NM_014258
SYCP2hsa-miR-472980.2609NM_014258
Page: 1

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Motifs and transcription factors (TFs) regulating SYCP2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SYCP2taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
SYCP2hdpi__ETV4ETV4 (directAnnotation).
SYCP2metacluster_182.10ZFX (directAnnotation).
Page: 1

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."