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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: STRBP

Summary for STRBP

Gene informationGene symbol

STRBP

Ensembl ID

ENSG00000165209

Entrez ID

55342

Gene namespermatid perinuclear RNA binding protein
SynonymsFLJ11307|ILF3L|SPNR
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: STRBP

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.4186933.21e-28

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.2893280.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells-0.3088436.13e-16

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.3533770.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.4729130.00e+00

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Expression of STRBP in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to STRBP

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating STRBP

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
STRBPhsa-miR-520d-5p99.8694NM_001171137
STRBPhsa-miR-524-5p99.8694NM_001171137
STRBPhsa-miR-3529-3p99.1977NM_001171137
STRBPhsa-miR-129798.8721NM_001171137
STRBPhsa-miR-539-5p98.6263NM_001171137
STRBPhsa-miR-26a-5p98.3011NM_001171137
STRBPhsa-miR-26b-5p98.3011NM_001171137
STRBPhsa-miR-135b-5p98.0803NM_001171137
STRBPhsa-miR-135a-5p98.0803NM_001171137
STRBPhsa-miR-446597.9778NM_001171137
STRBPhsa-miR-391997.7057NM_001171137
STRBPhsa-miR-1213696.4194NM_001171137
STRBPhsa-miR-477596.3775NM_001171137
STRBPhsa-miR-4782-3p95.9548NM_001171137
STRBPhsa-miR-6766-3p95.9548NM_001171137
STRBPhsa-miR-219a-5p95.9548NM_001171137
STRBPhsa-miR-6815-3p95.0733NM_001171137
STRBPhsa-miR-311994.6602NM_001171137
STRBPhsa-miR-848594.4486NM_001171137
STRBPhsa-miR-202-3p94.4167NM_001171137
STRBPhsa-miR-6856-3p93.5666NM_001171137
STRBPhsa-miR-205-5p92.6872NM_001171137
STRBPhsa-miR-54392.6615NM_001171137
STRBPhsa-miR-335-3p91.7265NM_001171137
STRBPhsa-miR-6809-3p91.1352NM_001171137
STRBPhsa-miR-60390.4229NM_001171137
STRBPhsa-miR-4668-3p89.761NM_001171137
STRBPhsa-miR-137-3p89.7243NM_001171137
STRBPhsa-miR-449289.5472NM_001171137
STRBPhsa-miR-394189.3974NM_001171137
STRBPhsa-miR-450088.9529NM_001171137
STRBPhsa-miR-551b-5p88.8157NM_001171137
STRBPhsa-miR-548s88.5359NM_001171137
STRBPhsa-miR-471988.0325NM_001171137
STRBPhsa-miR-205387.8679NM_001171137
STRBPhsa-miR-3925-5p87.8207NM_001171137
STRBPhsa-miR-425187.4129NM_001171137
STRBPhsa-miR-548x-3p87.2064NM_001171137
STRBPhsa-miR-548aj-3p87.2064NM_001171137
STRBPhsa-miR-130387.0292NM_001171137
STRBPhsa-miR-4690-3p87.0169NM_001171137
STRBPhsa-miR-568587.0169NM_001171137
STRBPhsa-miR-3158-3p86.9084NM_001171137
STRBPhsa-miR-5001-5p86.689NM_001171137
STRBPhsa-miR-449886.689NM_001171137
STRBPhsa-miR-76286.689NM_001171137
STRBPhsa-miR-568086.6359NM_001171137
STRBPhsa-miR-124-5p86.488NM_001171137
STRBPhsa-let-7i-5p85.9958NM_001171137
STRBPhsa-let-7a-5p85.9958NM_001171137
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Motifs and transcription factors (TFs) regulating STRBP

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
STRBPmetacluster_7.13ZFX (directAnnotation).
STRBPtransfac_pro__M05578ZFP92 (inferredBy_Orthology).
STRBPmetacluster_151.2ZNF23 (directAnnotation).
STRBPmetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
STRBPmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
STRBPkznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
STRBPmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
STRBPhdpi__ETV4ETV4 (directAnnotation).
STRBPhocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
STRBPhomer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
STRBPmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
STRBPcisbp__M08198ELF1 (directAnnotation).
STRBPtransfac_pro__M06331ZNF343 (directAnnotation).
STRBPtaipale_tf_pairs__ELK1_FOXI1_WGTTKMCGGAWRTN_CAPELK1; FOXI1 (directAnnotation).
STRBPjaspar__MA0748.2YY2 (directAnnotation).
STRBPtaipale_tf_pairs__MYBL1_EOMES_RSGTGNNNAACGK_CAP_reprEOMES; MYBL1 (directAnnotation).
STRBPdbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
STRBPtransfac_pro__M12697ZNF142 (directAnnotation).
STRBPkznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
STRBPkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
STRBPmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
STRBPcisbp__M07938E2F1 (directAnnotation).
STRBPmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
STRBPjaspar__MA1122.1TFDP1 (directAnnotation).
STRBPmetacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
STRBPtransfac_pro__M01175ZBTB7B (directAnnotation).
STRBPmetacluster_3.14WT1; WT1 (directAnnotation).
STRBPmetacluster_72.9SALL2 (directAnnotation). SALL2 (inferredBy_Orthology).
STRBPtaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
STRBPtransfac_pro__M01253CNOT3 (directAnnotation).
STRBPtransfac_pro__M02090E2F4 (directAnnotation).
STRBPmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
STRBPkznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
STRBPdbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
STRBPtransfac_pro__M01303SP1 (directAnnotation).
STRBPkznf__ZNF846_Imbeault2017_RP_ChIP-seqZNF846 (directAnnotation).
STRBPmetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
STRBPtaipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
STRBPkznf__ZNF548_Imbeault2017_OM_RCADEZNF548 (directAnnotation).
STRBPhomer__GGGGGGGG_MazMAZ (directAnnotation).
STRBPkznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
STRBPdbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
STRBPkznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
STRBPkznf__ZNF2_Imbeault2017_RP_ChIP-seqZNF2 (directAnnotation).
STRBPmetacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
STRBPtransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
STRBPmetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
STRBPmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
STRBPkznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
STRBPjaspar__MA0597.2THAP1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."