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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: STMN1

Summary for STMN1

Gene informationGene symbol

STMN1

Ensembl ID

ENSG00000117632

Entrez ID

3925

Gene namestathmin 1
SynonymsC1orf215|FLJ32206|Lag|LAP18|OP18|PP17|PP19|PR22|SMN
Gene typeprotein_coding
UniProtAcc

P16949


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Dataset with differentially expressed gene: STMN1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.6523950.00e+00

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.6418930.00e+00

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.2959966.61e-07

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells0.2756542.34e-33

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells-0.2888351.83e-27

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells-0.7654999.94e-07

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells1.33170.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells-0.6387264.23e-03

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postCD8+ T cells0.4671740.00e+00

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postCD4+ T cells0.3131785.73e-15

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells0.7612347.40e-14

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postpDCs0.8779573.75e-02

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro-0.5778281.21e-04

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells1.655990.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-1.226930.00e+00

GSE161195

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapyDARA-KRD (daratumumab + carfilzomib + lenalidomide + dexamethasone)postMalignant cells0.5435210.00e+00

GSE158457

PDX cellsCell lineAcute lymphoblastic leukemiaT-cell acute lymphoblastic leukemia (ALL)Targeted therapydasatinibNAMalignant cells-0.3738270.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.6300960.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.3617592.02e-34

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells1.535820.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells-0.7347823.53e-12

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.6352940.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells-1.082541.92e-03

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.5133910.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2607441.18e-07

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-1.015580.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.7908240.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMalignant cells-0.6811320.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells1.072680.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.4808350.00e+00

GSE164897_Vem

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenibNAMalignant cells0.3896420.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.5391390.00e+00

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Expression of STMN1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to STMN1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

STMN1

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating STMN1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
STMN1hsa-miR-6797-5p91.5845NM_203399
STMN1hsa-miR-1249-5p91.5845NM_203399
STMN1hsa-miR-4766-5p89.8252NM_203399
STMN1hsa-miR-877-3p88.7212NM_001145454
STMN1hsa-miR-539-5p88.0231NM_001145454
STMN1hsa-miR-130287.7164NM_203399
STMN1hsa-miR-3120-3p86.5821NM_001145454
STMN1hsa-miR-629-3p86.1152NM_001145454
STMN1hsa-miR-143-5p85.7341NM_203399
STMN1hsa-miR-589-3p85.7204NM_203399
STMN1hsa-miR-6867-3p84.9595NM_001145454
STMN1hsa-miR-715084.7977NM_203399
STMN1hsa-miR-429884.4007NM_203399
STMN1hsa-miR-2355-5p82.2697NM_001145454
STMN1hsa-miR-3074-5p81.7203NM_001145454
STMN1hsa-miR-471981.5289NM_203399
STMN1hsa-miR-360980.9893NM_203399
STMN1hsa-miR-548ah-5p80.9893NM_203399
STMN1hsa-miR-3613-3p80.5799NM_001145454
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Motifs and transcription factors (TFs) regulating STMN1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
STMN1taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
STMN1kznf__ZNF25_Imbeault2017_OM_MEMEZNF25 (directAnnotation).
STMN1kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
STMN1kznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
STMN1metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
STMN1metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
STMN1metacluster_3.14WT1; WT1 (directAnnotation).
STMN1cisbp__M07938E2F1 (directAnnotation).
STMN1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
STMN1transfac_pro__M07397ZNF148 (directAnnotation).
STMN1metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
STMN1metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
STMN1taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
STMN1metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
STMN1metacluster_7.13ZFX (directAnnotation).
STMN1metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
STMN1homer__GGGGGGGG_MazMAZ (directAnnotation).
STMN1transfac_pro__M01175ZBTB7B (directAnnotation).
STMN1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
STMN1tfdimers__MD00151CHURC1 (directAnnotation).
STMN1metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
STMN1metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
STMN1transfac_pro__M01303SP1 (directAnnotation).
STMN1swissregulon__hs__CHD1CHD1 (directAnnotation).
STMN1transfac_pro__M01714KLF15 (directAnnotation).
STMN1metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
STMN1hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
STMN1transfac_pro__M02089E2F3 (directAnnotation).
STMN1metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
STMN1hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
STMN1metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
STMN1transfac_pro__M07436WT1 (directAnnotation).
STMN1transfac_pro__M02281SP1 (directAnnotation).
STMN1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
STMN1metacluster_3.3KLF10; KLF15; KLF16; KLF9; SP1 (directAnnotation).
STMN1transfac_pro__M02898SMAD3 (directAnnotation).
STMN1transfac_public__M00491PATZ1 (directAnnotation).
STMN1transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
STMN1metacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
STMN1dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
STMN1metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
STMN1jaspar__MA1122.1TFDP1 (directAnnotation).
STMN1metacluster_34.3EGR1; ETS1; SETDB1; SIX5; SIX5; ZNF143; ZNF76 (directAnnotation).
STMN1metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
STMN1metacluster_34.4ETS1; ETS1; ETS1; HCFC1; SIX5; SIX5; SIX5; SIX5; SMARCC2; SMARCC2; THAP11; THAP11; ZNF143; ZNF143; ZNF143; ZNF143 (directAnnotation). TBX2; THAP11; THAP11; ZNF143 (inferredBy_Orthology).
STMN1transfac_public__M00024E2F1 (directAnnotation).
STMN1taipale_tf_pairs__POU2F1_ELK1_NCCGGATATGCAN_CAPELK1; POU2F1 (directAnnotation).
STMN1metacluster_161.2LHX8 (directAnnotation).
STMN1metacluster_10.17ARNT (inferredBy_Orthology).
STMN1cisbp__M01752USF2 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."