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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: STK39

Summary for STK39

Gene informationGene symbol

STK39

Ensembl ID

ENSG00000198648

Entrez ID

27347

Gene nameserine/threonine kinase 39
SynonymsDCHT|SPAK
Gene typeprotein_coding
UniProtAcc

Q9UEW8


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Dataset with differentially expressed gene: STK39

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3309610.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.479330.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3543493.00e-15

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Expression of STK39 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to STK39

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating STK39

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
STK39hsa-miR-129799.3221NM_013233
STK39hsa-miR-26b-5p98.6685NM_013233
STK39hsa-miR-26a-5p98.6685NM_013233
STK39hsa-miR-10b-3p97.8627NM_013233
STK39hsa-miR-446597.7897NM_013233
STK39hsa-miR-30a-5p96.826NM_013233
STK39hsa-miR-30d-5p96.826NM_013233
STK39hsa-miR-30c-5p96.826NM_013233
STK39hsa-miR-30e-5p96.826NM_013233
STK39hsa-miR-30b-5p96.826NM_013233
STK39hsa-miR-498-5p96.6279NM_013233
STK39hsa-miR-477596.276NM_013233
STK39hsa-miR-1277-5p95.821NM_013233
STK39hsa-miR-5582-3p95.3432NM_013233
STK39hsa-miR-6501-5p95.2756NM_013233
STK39hsa-miR-192-3p94.912NM_013233
STK39hsa-miR-5585-5p94.0573NM_013233
STK39hsa-miR-58393.6465NM_013233
STK39hsa-miR-432993.6329NM_013233
STK39hsa-miR-570093.4979NM_013233
STK39hsa-miR-449c-5p92.3767NM_013233
STK39hsa-miR-34b-5p92.3767NM_013233
STK39hsa-miR-2682-5p92.3767NM_013233
STK39hsa-miR-3145-5p92.0583NM_013233
STK39hsa-miR-744-3p91.8858NM_013233
STK39hsa-miR-590-3p91.7721NM_013233
STK39hsa-miR-450791.5839NM_013233
STK39hsa-miR-3940-5p91.5839NM_013233
STK39hsa-miR-442891.5324NM_013233
STK39hsa-miR-5011-5p91.2369NM_013233
STK39hsa-miR-426990.3159NM_013233
STK39hsa-miR-6715b-5p90.3159NM_013233
STK39hsa-miR-6761-5p89.9237NM_013233
STK39hsa-miR-4639-5p89.6379NM_013233
STK39hsa-miR-447089.3623NM_013233
STK39hsa-miR-60789.2164NM_013233
STK39hsa-miR-312589.1701NM_013233
STK39hsa-miR-10527-5p89.1259NM_013233
STK39hsa-miR-425189.0658NM_013233
STK39hsa-miR-675-3p88.8821NM_013233
STK39hsa-miR-6507-5p88.4225NM_013233
STK39hsa-miR-182787.662NM_013233
STK39hsa-miR-465887.5778NM_013233
STK39hsa-miR-6790-5p87.5778NM_013233
STK39hsa-miR-127687.431NM_013233
STK39hsa-miR-391686.9734NM_013233
STK39hsa-miR-6859-5p86.9734NM_013233
STK39hsa-miR-4799-5p86.688NM_013233
STK39hsa-miR-3529-3p86.4449NM_013233
STK39hsa-miR-432886.3099NM_013233
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Motifs and transcription factors (TFs) regulating STK39

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
STK39taipale_tf_pairs__ATF4_TEF_RNMTGATGCAATN_CAPATF4; TEF (directAnnotation).
STK39taipale_tf_pairs__ATF4_CEBPD_NGATGATGCAATNN_CAPATF4; CEBPD (directAnnotation).
STK39metacluster_35.7HINFP (inferredBy_Orthology).
STK39metacluster_135.11NR2C2 (directAnnotation).
STK39metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
STK39metacluster_144.3ZNF704; ZNF704 (directAnnotation).
STK39metacluster_7.13ZFX (directAnnotation).
STK39kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
STK39cisbp__M00968MTF2 (directAnnotation).
STK39metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
STK39metacluster_160.20JUND; PRDM15 (directAnnotation).
STK39cisbp__M00341PAX6 (directAnnotation).
STK39metacluster_198.3ZFP64 (directAnnotation).
STK39metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
STK39metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
STK39metacluster_61.1DEAF1; DEAF1 (directAnnotation).
STK39cisbp__M00788ZFY (inferredBy_Orthology).
STK39kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
STK39metacluster_175.1ZNF283 (directAnnotation).
STK39hdpi__ZNF304ZNF304 (directAnnotation).
STK39transfac_pro__M02844BCL6B (inferredBy_Orthology).
STK39metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
STK39metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
STK39transfac_pro__M01199TRIM28 (directAnnotation).
STK39transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
STK39transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
STK39transfac_pro__M03806ZBTB7C (directAnnotation).
STK39transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
STK39kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
STK39taipale_tf_pairs__E2F3_HES7_NNNNGCGCSNNNNNCACGTGNN_CAPE2F3; HES7 (directAnnotation).
STK39transfac_pro__M02089E2F3 (directAnnotation).
STK39taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
STK39transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
STK39transfac_pro__M04817ZBTB33 (directAnnotation).
STK39tfdimers__MD00483ZBTB14 (directAnnotation).
STK39cisbp__M07938E2F1 (directAnnotation).
STK39jaspar__MA0535.1SMAD9 (inferredBy_Orthology).
STK39metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
STK39metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
STK39taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
STK39jaspar__MA1122.1TFDP1 (directAnnotation).
STK39taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
STK39"Fostamatinib"

DB12010

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."