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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: STAG2

Summary for STAG2

Gene informationGene symbol

STAG2

Ensembl ID

ENSG00000101972

Entrez ID

10735

Gene namestromal antigen 2
SynonymsSA-2|SA2|SCC3B
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: STAG2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.2998570.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.3578568.32e-19

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.4240920.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.2656080.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.3472150.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.2691444.03e-13

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2905881.06e-09

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.2635772.10e-08

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Expression of STAG2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to STAG2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating STAG2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
STAG2hsa-miR-5011-5p99.9738NM_001042749
STAG2hsa-miR-316399.6531NM_001042749
STAG2hsa-miR-548c-3p99.5287NM_001042749
STAG2hsa-miR-190a-3p99.5013NM_001282418
STAG2hsa-miR-338-5p98.6883NM_001282418
STAG2hsa-miR-590-3p98.2256NM_001282418
STAG2hsa-miR-877-3p97.9031NM_001042749
STAG2hsa-miR-4735-5p97.4967NM_001042749
STAG2hsa-miR-469897.4296NM_001042749
STAG2hsa-miR-570-3p97.3944NM_001042749
STAG2hsa-miR-4762-3p97.2806NM_001042749
STAG2hsa-miR-140-3p94.6108NM_001282418
STAG2hsa-miR-477594.4333NM_001282418
STAG2hsa-miR-197-3p94.3791NM_001282418
STAG2hsa-miR-548n94.3542NM_001282418
STAG2hsa-miR-5580-3p93.9458NM_001282418
STAG2hsa-miR-808093.8249NM_001042749
STAG2hsa-miR-129092.8384NM_001282418
STAG2hsa-miR-427992.6372NM_001042749
STAG2hsa-miR-366292.5998NM_001282418
STAG2hsa-miR-570692.3177NM_001282418
STAG2hsa-miR-4782-5p92.3177NM_001282418
STAG2hsa-miR-20692.2692NM_001042749
STAG2hsa-miR-1-3p92.2692NM_001042749
STAG2hsa-miR-518a-5p92.1328NM_001042749
STAG2hsa-miR-52792.1328NM_001042749
STAG2hsa-miR-5692a92.0811NM_001282418
STAG2hsa-miR-450392.0177NM_001282418
STAG2hsa-miR-5579-3p91.8654NM_001042749
STAG2hsa-miR-580-5p91.5353NM_001042749
STAG2hsa-miR-61391.2049NM_001042749
STAG2hsa-miR-5003-5p91.1326NM_001042749
STAG2hsa-miR-488-3p90.5493NM_001042749
STAG2hsa-miR-6828-3p90.5082NM_001042749
STAG2hsa-miR-118390.4327NM_001042749
STAG2hsa-miR-3622b-5p90.3878NM_001282418
STAG2hsa-miR-453090.3305NM_001042749
STAG2hsa-miR-875-5p90.1235NM_001282418
STAG2hsa-miR-1213189.9303NM_001282418
STAG2hsa-miR-6839-5p89.8762NM_001282418
STAG2hsa-miR-607189.8473NM_001042749
STAG2hsa-miR-365089.6323NM_001042749
STAG2hsa-miR-1212889.5925NM_001042749
STAG2hsa-miR-3127-5p89.4153NM_001042749
STAG2hsa-miR-153-5p89.2072NM_001282418
STAG2hsa-miR-21-5p89.0306NM_001042749
STAG2hsa-miR-3688-3p88.4783NM_001042749
STAG2hsa-miR-4482-3p88.4311NM_001282418
STAG2hsa-miR-590-5p88.2884NM_001042749
STAG2hsa-miR-426387.8292NM_001042749
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Motifs and transcription factors (TFs) regulating STAG2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
STAG2taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
STAG2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
STAG2transfac_pro__M07397ZNF148 (directAnnotation).
STAG2metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
STAG2metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
STAG2dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
STAG2taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
STAG2metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
STAG2metacluster_7.13ZFX (directAnnotation).
STAG2metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
STAG2homer__GGGGGGGG_MazMAZ (directAnnotation).
STAG2transfac_pro__M01175ZBTB7B (directAnnotation).
STAG2taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
STAG2tfdimers__MD00151CHURC1 (directAnnotation).
STAG2metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
STAG2metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
STAG2transfac_pro__M01303SP1 (directAnnotation).
STAG2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
STAG2swissregulon__hs__CHD1CHD1 (directAnnotation).
STAG2transfac_pro__M02090E2F4 (directAnnotation).
STAG2transfac_pro__M01714KLF15 (directAnnotation).
STAG2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
STAG2jaspar__MA1122.1TFDP1 (directAnnotation).
STAG2hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
STAG2transfac_pro__M02089E2F3 (directAnnotation).
STAG2transfac_pro__M12604ZNF444 (directAnnotation).
STAG2metacluster_3.14WT1; WT1 (directAnnotation).
STAG2metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
STAG2metacluster_126.3LIN28B; LIN28B (directAnnotation).
STAG2hocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
STAG2hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
STAG2metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
STAG2cisbp__M07938E2F1 (directAnnotation).
STAG2homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
STAG2transfac_pro__M07436WT1 (directAnnotation).
STAG2transfac_pro__M02281SP1 (directAnnotation).
STAG2taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
STAG2kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
STAG2metacluster_3.3KLF10; KLF15; KLF16; KLF9; SP1 (directAnnotation).
STAG2transfac_pro__M02898SMAD3 (directAnnotation).
STAG2transfac_public__M00491PATZ1 (directAnnotation).
STAG2transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
STAG2metacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
STAG2metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
STAG2hdpi__TP73TP73 (directAnnotation).
STAG2taipale_tf_pairs__TEAD4_ETV4_RCCGGAAATRCC_CAPETV4; TEAD4 (directAnnotation).
STAG2swissregulon__mm__E2f7E2F7 (inferredBy_Orthology).
STAG2taipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
STAG2metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
STAG2jaspar__MA1708.1ETV7 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."