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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: STAG1

Summary for STAG1

Gene informationGene symbol

STAG1

Ensembl ID

ENSG00000118007

Entrez ID

10274

Gene namestromal antigen 1
SynonymsSA-1|SA1|SCC3A
Gene typeprotein_coding
UniProtAcc

Q8WVM7


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Dataset with differentially expressed gene: STAG1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.3364340.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3824430.00e+00

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Expression of STAG1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to STAG1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating STAG1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
STAG1hsa-miR-316398.9903NM_005862
STAG1hsa-miR-428298.6695NM_005862
STAG1hsa-miR-6862-5p97.4802NM_005862
STAG1hsa-miR-425397.4802NM_005862
STAG1hsa-miR-96-5p96.2099NM_005862
STAG1hsa-miR-182-5p96.2099NM_005862
STAG1hsa-miR-664b-3p96.0398NM_005862
STAG1hsa-miR-579-3p96.0398NM_005862
STAG1hsa-miR-715095.4658NM_005862
STAG1hsa-miR-5692a94.8863NM_005862
STAG1hsa-miR-613294.5751NM_005862
STAG1hsa-miR-6836-5p94.5751NM_005862
STAG1hsa-miR-1213394.4652NM_005862
STAG1hsa-miR-1271-5p94.4652NM_005862
STAG1hsa-miR-1207-5p94.2326NM_005862
STAG1hsa-miR-4763-3p94.2097NM_005862
STAG1hsa-miR-335-5p94.1194NM_005862
STAG1hsa-miR-133a-5p93.7103NM_005862
STAG1hsa-miR-548at-5p93.0852NM_005862
STAG1hsa-miR-998592.9803NM_005862
STAG1hsa-miR-27a-3p92.9803NM_005862
STAG1hsa-miR-27b-3p92.9803NM_005862
STAG1hsa-miR-548c-3p92.4988NM_005862
STAG1hsa-miR-471992.416NM_005862
STAG1hsa-miR-366290.1467NM_005862
STAG1hsa-miR-513b-5p89.4551NM_005862
STAG1hsa-miR-548an88.3107NM_005862
STAG1hsa-miR-410-3p88.0958NM_005862
STAG1hsa-miR-208b-5p87.9424NM_005862
STAG1hsa-miR-208a-5p87.9424NM_005862
STAG1hsa-miR-4760-3p87.4068NM_005862
STAG1hsa-miR-3120-3p85.8135NM_005862
STAG1hsa-miR-4747-5p85.4931NM_005862
STAG1hsa-miR-5196-5p85.4931NM_005862
STAG1hsa-let-7c-3p85.2934NM_005862
STAG1hsa-miR-119785.1971NM_005862
STAG1hsa-miR-6875-3p84.8074NM_005862
STAG1hsa-miR-3934-5p84.8001NM_005862
STAG1hsa-miR-848584.5843NM_005862
STAG1hsa-miR-580-3p84.5466NM_005862
STAG1hsa-miR-5590-3p83.8254NM_005862
STAG1hsa-miR-142-5p83.8254NM_005862
STAG1hsa-miR-314883.7129NM_005862
STAG1hsa-miR-5011-3p83.7089NM_005862
STAG1hsa-miR-4650-3p83.4947NM_005862
STAG1hsa-miR-4742-3p83.0538NM_005862
STAG1hsa-miR-550b-3p82.9823NM_005862
STAG1hsa-miR-473682.528NM_005862
STAG1hsa-miR-3682-5p82.3149NM_005862
STAG1hsa-miR-3692-3p82.1166NM_005862
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Motifs and transcription factors (TFs) regulating STAG1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
STAG1metacluster_7.13ZFX (directAnnotation).
STAG1cisbp__M01863ZNF711 (inferredBy_Orthology).
STAG1metacluster_151.2ZNF23 (directAnnotation).
STAG1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
STAG1transfac_pro__M05479ZNF580 (directAnnotation).
STAG1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
STAG1kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
STAG1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
STAG1metacluster_182.10ZFX (directAnnotation).
STAG1hdpi__ETV4ETV4 (directAnnotation).
STAG1jaspar__MA0748.2YY2 (directAnnotation).
STAG1transfac_pro__M05628ZNF735 (directAnnotation).
STAG1homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
STAG1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
STAG1jaspar__MA0079.5SP1 (directAnnotation).
STAG1taipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
STAG1metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
STAG1dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
STAG1transfac_pro__M04950EGR1 (directAnnotation).
STAG1metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
STAG1taipale_tf_pairs__ETV2_HES7_NNCACGTGNNNNNCGGAWRY_CAP_reprETV2; HES7 (directAnnotation).
STAG1taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
STAG1taipale_tf_pairs__ERF_HES7_NNCACGTGNNNNCCGGAANN_CAP_reprERF; HES7 (directAnnotation).
STAG1metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
STAG1taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
STAG1transfac_pro__M00652NRF1 (directAnnotation).
STAG1taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
STAG1transfac_pro__M04866HDAC2 (directAnnotation).
STAG1jaspar__MA1122.1TFDP1 (directAnnotation).
STAG1swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
STAG1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
STAG1metacluster_34.3EGR1; ETS1; SETDB1; SIX5; SIX5; ZNF143; ZNF76 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."