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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SSBP3

Summary for SSBP3

Gene informationGene symbol

SSBP3

Ensembl ID

ENSG00000157216

Entrez ID

23648

Gene namesingle stranded DNA binding protein 3
SynonymsCSDP|FLJ10355|SSDP|SSDP1
Gene typeprotein_coding
UniProtAcc

Q9BWW4


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Dataset with differentially expressed gene: SSBP3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.4044468.47e-05

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.3002710.00e+00

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Expression of SSBP3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SSBP3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SSBP3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SSBP3hsa-miR-4795-3p98.5067NM_001009955
SSBP3hsa-miR-6785-5p97.6486NM_001009955
SSBP3hsa-miR-4728-5p97.6486NM_001009955
SSBP3hsa-miR-6883-5p96.8474NM_001009955
SSBP3hsa-miR-149-3p96.8474NM_001009955
SSBP3hsa-miR-1213695.7133NM_001009955
SSBP3hsa-miR-6771-3p95.6287NM_001009955
SSBP3hsa-miR-7-2-3p94.0352NM_001009955
SSBP3hsa-miR-7-1-3p94.0352NM_001009955
SSBP3hsa-miR-4738-3p93.884NM_001009955
SSBP3hsa-miR-1285-5p90.0904NM_001009955
SSBP3hsa-miR-2115-5p89.8792NM_001009955
SSBP3hsa-miR-469289.4902NM_001009955
SSBP3hsa-miR-126-5p88.4817NM_001009955
SSBP3hsa-miR-6756-5p87.1252NM_001009955
SSBP3hsa-miR-6766-5p87.1252NM_001009955
SSBP3hsa-miR-7111-3p86.7495NM_001009955
SSBP3hsa-miR-6805-5p86.724NM_001009955
SSBP3hsa-miR-431186.2017NM_001009955
SSBP3hsa-miR-451485.7886NM_001009955
SSBP3hsa-miR-3679-3p83.8394NM_001009955
SSBP3hsa-miR-442281.2821NM_001009955
SSBP3hsa-miR-465181.2803NM_001009955
SSBP3hsa-miR-60881.2803NM_001009955
SSBP3hsa-miR-2355-3p81.1694NM_001009955
SSBP3hsa-miR-124880.4208NM_001009955
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Motifs and transcription factors (TFs) regulating SSBP3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SSBP3taipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
SSBP3cisbp__M00808MYPOP (inferredBy_Orthology).
SSBP3transfac_pro__M06404ZNF497 (directAnnotation).
SSBP3transfac_pro__M05815ZNF613 (directAnnotation).
SSBP3hocomoco__KAISO_HUMAN.H11MO.2.AZBTB33 (directAnnotation).
SSBP3metacluster_155.28ZFP64 (directAnnotation). ZFP64 (inferredBy_Orthology).
SSBP3metacluster_136.3MAX; MXI1; MXI1; RFX1; RFX1; RFX1; RFX1; RFX1; RFX1; RFX1; RFX1; RFX1; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX4; RFX4; RFX4; RFX4; RFX5; RFX5; RFX5; SREBF1; ZBTB7B (directAnnotation). RFX1; RFX1; RFX1; RFX1; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX3; RFX3; RFX3; RFX3; RFX3; RFX4; RFX4; RFX4; RFX6; RFX6; RFX6; RFX7; RFX8; RFX8 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."