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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SRF

Summary for SRF

Gene informationGene symbol

SRF

Ensembl ID

ENSG00000112658

Entrez ID

6722

Gene nameserum response factor
SynonymsMCM1
Gene typeprotein_coding
UniProtAcc

P11831


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Dataset with differentially expressed gene: SRF

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3182491.34e-06

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Expression of SRF in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SRF

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

SRF

Unusual Activation of Pro-survival Pathway
Page: 1

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MicroRNAs (miRNA) regulating SRF

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SRFhsa-miR-196a-3p97.4042NM_001292001
SRFhsa-miR-569897.0107NM_003131
SRFhsa-miR-427996.9203NM_001292001
SRFhsa-miR-7111-5p96.8677NM_003131
SRFhsa-miR-6870-5p96.6555NM_003131
SRFhsa-miR-4723-5p95.8015NM_003131
SRFhsa-miR-6729-3p94.692NM_001292001
SRFhsa-miR-122-3p94.5106NM_003131
SRFhsa-miR-1213694.3692NM_003131
SRFhsa-miR-4746-5p94.318NM_001292001
SRFhsa-miR-6840-3p94.2777NM_003131
SRFhsa-miR-5196-5p94.1631NM_003131
SRFhsa-miR-4747-5p94.1631NM_003131
SRFhsa-miR-891a-3p93.9522NM_001292001
SRFhsa-miR-655-3p93.7285NM_003131
SRFhsa-miR-374c-5p93.7285NM_003131
SRFhsa-miR-6867-5p92.9307NM_003131
SRFhsa-miR-6842-3p92.9039NM_001292001
SRFhsa-miR-95-5p92.2589NM_001292001
SRFhsa-miR-4732-3p90.7561NM_001292001
SRFhsa-miR-6764-5p89.4777NM_003131
SRFhsa-miR-548an88.9422NM_003131
SRFhsa-miR-4667-3p88.5253NM_001292001
SRFhsa-miR-3688-5p87.7325NM_001292001
SRFhsa-miR-6721-5p87.3725NM_001292001
SRFhsa-miR-64786.882NM_001292001
SRFhsa-miR-848586.8485NM_003131
SRFhsa-miR-335-5p86.7079NM_003131
SRFhsa-miR-6749-3p86.489NM_001292001
SRFhsa-miR-1915-3p85.9126NM_003131
SRFhsa-miR-6825-5p85.6951NM_003131
SRFhsa-miR-431984.7055NM_001292001
SRFhsa-miR-4758-3p84.5508NM_001292001
SRFhsa-miR-511-5p83.3898NM_003131
SRFhsa-miR-10401-5p83.2517NM_003131
SRFhsa-miR-447083.0259NM_001292001
SRFhsa-miR-317982.8756NM_003131
SRFhsa-miR-1207-3p82.4808NM_001292001
SRFhsa-miR-10398-5p82.0554NM_001292001
SRFhsa-miR-6794-5p81.6989NM_003131
SRFhsa-miR-4716-3p80.8769NM_003131
SRFhsa-miR-6756-5p80.7795NM_003131
SRFhsa-miR-6766-5p80.7795NM_003131
SRFhsa-miR-6814-5p80.6658NM_001292001
SRFhsa-miR-125a-5p80.6322NM_001292001
SRFhsa-miR-125b-5p80.6322NM_001292001
SRFhsa-miR-670-5p80.4949NM_001292001
SRFhsa-miR-5011-5p80.2003NM_003131
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Motifs and transcription factors (TFs) regulating SRF

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SRFmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
SRFmetacluster_198.3ZFP64 (directAnnotation).
SRFmetacluster_151.2ZNF23 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."