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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: SREBF2

Summary for SREBF2

Gene informationGene symbol

SREBF2

Ensembl ID

ENSG00000198911

Entrez ID

6721

Gene namesterol regulatory element binding transcription factor 2
SynonymsbHLHd2|SREBP2
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: SREBF2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.508782.23e-13

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.3914357.75e-43

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.2808419.28e-19

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Expression of SREBF2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SREBF2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SREBF2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SREBF2hsa-miR-6764-5p95.9498NM_004599
SREBF2hsa-miR-1915-3p95.0652NM_004599
SREBF2hsa-miR-6785-5p92.8487NM_004599
SREBF2hsa-miR-149-3p92.8487NM_004599
SREBF2hsa-miR-4728-5p92.8487NM_004599
SREBF2hsa-miR-6883-5p92.8487NM_004599
SREBF2hsa-miR-808592.5744NM_004599
SREBF2hsa-miR-6731-5p92.5744NM_004599
SREBF2hsa-miR-429391.1033NM_004599
SREBF2hsa-miR-430689.1799NM_004599
SREBF2hsa-miR-6797-5p88.7707NM_004599
SREBF2hsa-miR-1249-5p87.1456NM_004599
SREBF2hsa-miR-6825-5p85.108NM_004599
SREBF2hsa-miR-185-5p82.2596NM_004599
SREBF2hsa-miR-464482.2596NM_004599
SREBF2hsa-miR-570-3p82.2287NM_004599
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Motifs and transcription factors (TFs) regulating SREBF2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SREBF2kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
SREBF2taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
SREBF2transfac_pro__M07387ZBTB7A (directAnnotation).
SREBF2transfac_pro__M00716ZBTB14 (directAnnotation).
SREBF2swissregulon__hs__CHD1CHD1 (directAnnotation).
SREBF2metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
SREBF2kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
SREBF2jaspar__MA0604.1ATF1 (inferredBy_Orthology).
SREBF2homer__GGAAATTCCC_NFkB-p65-RelRELA (inferredBy_Orthology).
SREBF2transfac_pro__M06104ZNF16 (directAnnotation).
SREBF2metacluster_22.28BACH1 (directAnnotation).
SREBF2jaspar__MA1562.1SOX14 (directAnnotation).
SREBF2taipale_tf_pairs__CEBPG_ATF4_NNATGAYGCAAT_CAPATF4; CEBPG (directAnnotation).
SREBF2metacluster_111.6GMEB1; GMEB2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
SREBF2cisbp__M01725downMalignant cells

GSE131984_Pac

NA
SREBF2metacluster_57.3downMalignant cells

GSE131984_Pac

NA
SREBF2jaspar__MA1933.1downMalignant cells

GSE131984_Pac

NA
SREBF2jaspar__MA1933.1upMalignant cells

GSE186960

NA
SREBF2jaspar__MA1933.1upMalignant cells

GSE186960

NA
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."