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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SPP1

Summary for SPP1

Gene informationGene symbol

SPP1

Ensembl ID

ENSG00000118785

Entrez ID

6696

Gene namesecreted phosphoprotein 1
SynonymsBNSP|BSPI|ETA-1|OPN
Gene typeprotein_coding
UniProtAcc

P10451


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Dataset with differentially expressed gene: SPP1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostMono/Macro1.902311.25e-15

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro2.202125.34e-11

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostMono/Macro1.673954.61e-11

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro2.212120.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro2.849571.21e-05

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.7516890.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-3.40160.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells0.3880530.00e+00

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Expression of SPP1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SPP1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)
Gene symbolCell type with DEGInteraction IDInteracting pairGene AGene BIntegrinInteracting cell type1Interacting cell type2DatasetTimepointCondition
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroB cells

GSE169246_PacAteTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD4+ T cells

GSE169246_PacAteTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD8+ T cells

GSE169246_PacAteTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroMast cells

GSE169246_PacAteTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroNK cells

GSE169246_PacAteTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacropDCs

GSE169246_PacAteTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroB cells

GSE169246_PacAteTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD4+ T cells

GSE169246_PacAteTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD8+ T cells

GSE169246_PacAteTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroMast cells

GSE169246_PacAteTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroMono/Macro

GSE169246_PacAteTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroNK cells

GSE169246_PacAteTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacropDCs

GSE169246_PacAteTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATruecDCsMono/Macro

GSE169246_PacAteTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroB cells

GSE169246_PacTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD4+ T cells

GSE169246_PacTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD8+ T cells

GSE169246_PacTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroMono/Macro

GSE169246_PacTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroNK cells

GSE169246_PacTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacrocDCs

GSE169246_PacTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacropDCs

GSE169246_PacTissue

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroB cells

GSE169246_PacTissue

postsensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD4+ T cells

GSE169246_PacTissue

postsensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD8+ T cells

GSE169246_PacTissue

postsensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroMono/Macro

GSE169246_PacTissue

postsensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroNK cells

GSE169246_PacTissue

postsensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroB cells

GSE169246_PacTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD4+ T cells

GSE169246_PacTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD8+ T cells

GSE169246_PacTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroNK cells

GSE169246_PacTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacropDCs

GSE169246_PacTissue

preresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroB cells

GSE169246_PacTissue

presensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD4+ T cells

GSE169246_PacTissue

presensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD8+ T cells

GSE169246_PacTissue

presensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroMono/Macro

GSE169246_PacTissue

presensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroNK cells

GSE169246_PacTissue

presensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacrocDCs

GSE169246_PacTissue

presensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacropDCs

GSE169246_PacTissue

presensitive
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroB cells

GSE207422_Sin

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD4+ T cells

GSE207422_Sin

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroCD8+ T cells

GSE207422_Sin

postresistant
SPP1Mono/MacroCPI-SC069FF84F5SPP1_integrin_a9b1_complexSPP1NATrueMono/MacroMast cells

GSE207422_Sin

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroMast cells

GSE207422_Sin

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacroNK cells

GSE207422_Sin

postresistant
SPP1Mono/MacroCPI-SC0C81483EASPP1_integrin_a4b1_complexSPP1NATrueMono/MacropDCs

GSE207422_Sin

postresistant
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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

SPP1

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating SPP1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SPP1hsa-miR-4753-3p99.0803NM_001251830
SPP1hsa-miR-426298.2912NM_001251830
SPP1hsa-miR-181c-5p98.26NM_001251830
SPP1hsa-miR-181b-5p98.26NM_001251830
SPP1hsa-miR-181d-5p98.26NM_001251830
SPP1hsa-miR-181a-5p98.26NM_001251830
SPP1hsa-miR-5003-5p97.8874NM_000582
SPP1hsa-miR-4659b-3p96.6191NM_001251830
SPP1hsa-miR-4659a-3p96.6191NM_001251830
SPP1hsa-miR-7-2-3p95.9997NM_001251830
SPP1hsa-miR-7-1-3p95.9997NM_001251830
SPP1hsa-miR-130a-5p93.3251NM_001251830
SPP1hsa-miR-430790.9835NM_001251830
SPP1hsa-miR-130b-5p90.4083NM_001251830
SPP1hsa-miR-520e-5p88.8048NM_001251830
SPP1hsa-miR-425185.3575NM_001251830
SPP1hsa-miR-1213585.0658NM_001251830
SPP1hsa-miR-442282.2682NM_001251830
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Motifs and transcription factors (TFs) regulating SPP1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SPP1taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
SPP1metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
SPP1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
SPP1taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
SPP1taipale_tf_pairs__ETV2_DLX3_RSCGGAANNNNNNNTAATKR_CAP_reprDLX3; ETV2 (directAnnotation).
SPP1taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
SPP1taipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
SPP1metacluster_15.4SMAD6 (directAnnotation). SMAD6 (inferredBy_Orthology).
SPP1taipale_tf_pairs__GCM1_ETV7_NTNNNGGCGGAAGNNNTTCCNNN_CAP_reprETV7; GCM1 (directAnnotation).
SPP1taipale_tf_pairs__MYBL1_EOMES_NNSYGNCNAACNNNNNNCACRCNN_CAP_reprEOMES; MYBL1 (directAnnotation).
SPP1transfac_pro__M06397ZNF761 (directAnnotation).
SPP1metacluster_22.11NFE2 (directAnnotation).
SPP1metacluster_22.21NFE2L2 (inferredBy_Orthology).
SPP1taipale_tf_pairs__GCM1_CEBPB_MTRSGGGNNNNNNTTRCGYAAN_CAPCEBPB; GCM1 (directAnnotation).
SPP1transfac_pro__M06302ZNF506 (directAnnotation).
SPP1transfac_pro__M05542SNAPC4 (directAnnotation).
SPP1homer__TWGTCTGV_Smad3SMAD3 (inferredBy_Orthology).
SPP1transfac_pro__M06131ZNF10 (directAnnotation).
SPP1metacluster_22.12NFE2; NFE2L1 (directAnnotation).
SPP1transfac_pro__M06246ZNF177 (directAnnotation).
SPP1transfac_pro__M05842ZBTB41 (inferredBy_Orthology).
SPP1metacluster_22.37BACH1 (directAnnotation).
SPP1metacluster_22.19NFE2 (directAnnotation).
SPP1homer__GGAAATTCCC_NFkB-p65-RelRELA (inferredBy_Orthology).
SPP1metacluster_22.13MAFK (inferredBy_Orthology).
SPP1metacluster_22.32NFE2L2 (directAnnotation).
SPP1transfac_public__M00208NFKB1; RELA (directAnnotation).
SPP1tfdimers__MD00029IKZF2; NKX3-2 (directAnnotation).
SPP1kznf__ZNF584_Imbeault2017_OM_RCADEZNF584 (directAnnotation).
SPP1metacluster_22.29NFE2 (directAnnotation).
SPP1tfdimers__MD00208IRF1; LTF (directAnnotation).
SPP1metacluster_22.25NFE2L2 (directAnnotation).
SPP1transfac_pro__M06985BATF3 (directAnnotation).
SPP1metacluster_29.2BCL6; IRF3; IRF3; STAT1; STAT1; STAT1; STAT2; STAT3; STAT3; STAT3; STAT4; STAT4; STAT5A; STAT5A; STAT5A; STAT5A; STAT5B; STAT5B; STAT5B; STAT6 (directAnnotation). STAT3; STAT5A; STAT5A; STAT5A; STAT5A; STAT5A; STAT5B; STAT5B; STAT6; STAT6 (inferredBy_Orthology).
SPP1jaspar__MA1106.1HIF1A (directAnnotation).
SPP1transfac_pro__M06219ZNF266 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."