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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: SPI1

Summary for SPI1

Gene informationGene symbol

SPI1

Ensembl ID

ENSG00000066336

Entrez ID

6688

Gene nameSpi-1 proto-oncogene
SynonymsOF|PU.1|SFPI1|SPI-1|SPI-A
Gene typeprotein_coding
UniProtAcc

P17947


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Dataset with differentially expressed gene: SPI1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostcDCs0.4073284.34e-10

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro-0.4629030.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostcDCs0.379585.21e-05

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells-0.3428361.21e-10

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro0.2895246.43e-24

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelprecDCs0.6148272.90e-26

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells-0.264549.11e-06

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postpDCs-1.434459.57e-04

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro-0.3554315.11e-07

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.4188341.22e-22

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostErythrocytes0.4095212.65e-03

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.311113.82e-20

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.6262260.00e+00

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Expression of SPI1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SPI1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SPI1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SPI1hsa-miR-4728-5p87.4857NM_003120
SPI1hsa-miR-887-5p83.2761NM_003120
SPI1hsa-miR-6785-5p81.646NM_003120
SPI1hsa-miR-6780a-5p80.745NM_003120
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Motifs and transcription factors (TFs) regulating SPI1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SPI1taipale_tf_pairs__TEAD4_SPIB_RGAATGCGGAAGTN_CAP_1SPIB; TEAD4 (directAnnotation).
SPI1tfdimers__MD00222ASCL1; BHLHE40; BHLHE41; GATA1; GATA2; GATA3; GATA4; GATA5; GATA6; HAND1; HAND2; MAX; MITF; MXD1; MXD3; MXD4; MXI1; MYC; MYCN; MYF5; MYF6; MYOD1; MYOG; NHLH1; TAL1; TAL2; TCF12; TCF3; TCF4; TFE3; TFEB; USF1; USF2 (directAnnotation).
SPI1transfac_pro__M06692PRDM10 (directAnnotation).
SPI1transfac_pro__M05935ZNF382 (directAnnotation).
SPI1swissregulon__hs__HBP1HBP1 (directAnnotation).
SPI1metacluster_113.5OVOL1; OVOL1; OVOL2; OVOL2; OVOL2; OVOL2 (directAnnotation). OVOL1; OVOL1; OVOL1 (inferredBy_Orthology).
SPI1tfdimers__MD00039GATA1; GATA2; GATA3; GATA4; GATA5; GATA6 (directAnnotation).
SPI1metacluster_145.10ZNF24 (directAnnotation).
SPI1hocomoco__FOXP1_HUMAN.H11MO.0.AFOXP1 (directAnnotation).
SPI1transfac_pro__M04706RELA (directAnnotation).
SPI1hdpi__FOSL1FOSL1 (directAnnotation).
SPI1metacluster_156.4NFIL3 (directAnnotation). NFIL3 (inferredBy_Orthology).
SPI1metacluster_156.3DBP; DBP; DBP; DBP; DBP; DBP; DBP; DBP; HLF; HLF; HLF; HLF; HLF; HLF; HLF; NFIL3; NFIL3; NFIL3; NFIL3; NFIL3; NFIL3; NFIL3; TEF; TEF; TEF; TEF; TEF (directAnnotation). DBP; DBP; DBP; DBP; DBP; HLF; HLF; HLF; HLF; HLF; NFIL3; NFIL3; NFILZ; NFILZ; TEF; TEF; TEF; TEF (inferredBy_Orthology).
SPI1tfdimers__MD00404FOXA1; FOXA2; FOXA3; FOXP3 (directAnnotation).
SPI1cisbp__M01815CEBPE (inferredBy_Orthology).
SPI1metacluster_46.5HLF; TEF (directAnnotation).
SPI1jaspar__MA1954.1FOXO1 (directAnnotation).
SPI1taipale_tf_pairs__GCM1_CEBPB_MTRSGGGNNNNNNTTRCGYAAN_CAPCEBPB; GCM1 (directAnnotation).
SPI1transfac_pro__M05560AEBP2 (directAnnotation).
SPI1metacluster_59.1HOXA9; HOXA9; HOXA9; HOXB6; HOXB7; HOXB7; HOXB8; HOXB8; HOXC6; HOXC8; HOXC8; MEIS1; MEIS1; MEIS2; MEIS2; PBX1; PBX1; PBX1; PBX2; PBX2 (directAnnotation). HOXA9; HOXA9; HOXB4; HOXB6; HOXC6; HOXC9; HOXC9; LEF1; PDX1; PDX1; TCF7L2 (inferredBy_Orthology).
SPI1taipale_tf_pairs__TEAD4_SPDEF_RGWATSCGGATGNNNNTCCKNNN_CAP_reprSPDEF; TEAD4 (directAnnotation).
SPI1jaspar__MA1508.1IKZF1 (directAnnotation).
SPI1tfdimers__MD00554CUX1; EP300 (directAnnotation).
SPI1metacluster_82.5ZKSCAN8; ZNF205; ZNF227; ZNF594 (directAnnotation).
SPI1taipale_tf_pairs__PBX4_HOXA10_YNNRTAAATCAATCA_CAP_reprHOXA10; PBX4 (directAnnotation).
SPI1hocomoco__CUX2_HUMAN.H11MO.0.DCUX2 (directAnnotation).
SPI1taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
SPI1metacluster_95.1ZNF274; ZNF574; ZNF574 (directAnnotation).
SPI1transfac_pro__M06249ZNF616 (directAnnotation).
SPI1transfac_pro__M05829ZNF627 (directAnnotation).
SPI1transfac_pro__M06487ZNF695 (directAnnotation).
SPI1jaspar__MA1956.1FOXO1 (directAnnotation).
SPI1jaspar__MA1946.1FOXI1 (directAnnotation).
SPI1tfdimers__MD00221FOXG1; FOXO1; GABPA (directAnnotation).
SPI1jaspar__MA1955.1FOXO1 (directAnnotation).
SPI1kznf__ZNF3_Imbeault2017_RP_RCADEZNF3 (directAnnotation).
SPI1metacluster_46.2CEBPA; DDIT3; DDIT3 (directAnnotation).
SPI1metacluster_174.4PBX1; PBX1; PBX1; PBX1 (directAnnotation).
SPI1transfac_pro__M06962HES7 (inferredBy_Orthology).
SPI1metacluster_167.8ZKSCAN5; ZKSCAN5 (directAnnotation).
SPI1metacluster_57.5ZKSCAN5 (directAnnotation).
SPI1kznf__GLI4_Schmitges2016_ChIP-seqGLI4 (directAnnotation).
SPI1metacluster_64.15NR1H4; NR1H4; NR1I2; NR1I3; RXRA (directAnnotation). NR1H3 (inferredBy_Orthology).
SPI1metacluster_27.21CNOT6; ZNF112 (directAnnotation). ZNF112 (inferredBy_Orthology).
SPI1transfac_pro__M05825ZNF572 (directAnnotation).
SPI1kznf__ZNF77_Imbeault2017_RP_ChIP-seqZNF77 (directAnnotation).
SPI1metacluster_46.4CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; DBP; DBP; EP300; GATAD2A; HES2 (directAnnotation). CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPE; CEBPE; CEBPE; CEBPG; CEBPG; HLF; HLF (inferredBy_Orthology).
SPI1jaspar__MA1936.1FOXO1 (inferredBy_Orthology).
SPI1hocomoco__NKX61_MOUSE.H11MO.1.ANKX6-1 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
SPI1transfac_pro__M04722upcDCs

GSE169246_PacAteBlood

pre
SPI1metacluster_167.5upcDCs

GSE169246_PacBlood

post
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."