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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SP100

Summary for SP100

Gene informationGene symbol

SP100

Ensembl ID

ENSG00000067066

Entrez ID

6672

Gene nameSP100 nuclear antigen
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P23497


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Dataset with differentially expressed gene: SP100

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.756083.76e-06

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.3465450.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells-0.2698750.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostCD8+ T cells0.3537950.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostCD4+ T cells0.3604870.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD4+ T cells0.3976270.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMalignant cells0.2960751.25e-07

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3226120.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells-0.9961975.85e-05

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.3067112.21e-17

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2786793.23e-07

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.2625451.12e-08

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.6364380.00e+00

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Expression of SP100 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SP100

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SP100

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SP100hsa-miR-1911-3p93.9442NM_003113
SP100hsa-miR-4743-3p92.8761NM_001206704
SP100hsa-miR-5571-5p92.7767NM_001080391
SP100hsa-miR-6888-3p92.605NM_001206704
SP100hsa-miR-4777-5p92.3953NM_001080391
SP100hsa-miR-4693-3p92.2454NM_001206704
SP100hsa-miR-146a-3p91.6618NM_001080391
SP100hsa-miR-5590-5p91.0415NM_003113
SP100hsa-miR-4796-5p90.6827NM_001206704
SP100hsa-miR-4652-3p89.5716NM_001206704
SP100hsa-miR-580-3p89.4NM_001080391
SP100hsa-miR-629-3p88.7074NM_001080391
SP100hsa-miR-766-5p88.4225NM_003113
SP100hsa-miR-511-5p88.1031NM_001080391
SP100hsa-miR-1213187.9851NM_001080391
SP100hsa-miR-3529-3p87.7287NM_001206704
SP100hsa-miR-642b-5p86.9002NM_001080391
SP100hsa-miR-390786.7835NM_001206704
SP100hsa-miR-624-3p86.4353NM_001206704
SP100hsa-miR-3156-5p84.868NM_001206704
SP100hsa-miR-432684.6391NM_001080391
SP100hsa-miR-6500-5p84.0361NM_003113
SP100hsa-miR-4633-3p84.0361NM_003113
SP100hsa-miR-4774-3p83.5494NM_001080391
SP100hsa-miR-1212283.4963NM_001080391
SP100hsa-miR-551b-5p83.3374NM_001206701
SP100hsa-miR-34c-3p82.7662NM_001206704
SP100hsa-miR-128482.7481NM_003113
SP100hsa-miR-7161-5p82.707NM_001206701
SP100hsa-miR-510-3p82.6004NM_003113
SP100hsa-miR-548av-3p82.5835NM_001080391
SP100hsa-miR-134-3p82.4919NM_001080391
SP100hsa-miR-453182.1084NM_001080391
SP100hsa-miR-4776-3p82.0749NM_003113
SP100hsa-miR-19a-3p81.6017NM_001080391
SP100hsa-miR-19b-3p81.6017NM_001080391
SP100hsa-miR-7161-3p81.1992NM_001206704
SP100hsa-miR-6873-3p80.8853NM_003113
SP100hsa-miR-4711-3p80.8233NM_001080391
SP100hsa-miR-548c-3p80.6219NM_001206704
SP100hsa-miR-392380.0858NM_001080391
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Motifs and transcription factors (TFs) regulating SP100

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SP100taipale_tf_pairs__ATF4_CEBPD_NGATGATGCAATNN_CAPATF4; CEBPD (directAnnotation).
SP100metacluster_156.2ATF3; ATF4; ATF4; ATF4; ATF4; ATF4; ATF4; CEBPG; CEBPG; DDIT3; MYC (directAnnotation). ATF4; ATF4; ATF4; CEBPG; DDIT3 (inferredBy_Orthology).
SP100transfac_pro__M05788ZNF569 (inferredBy_Orthology).
SP100taipale_tf_pairs__ATF4_CEBPB_NNATGAYGCAAYN_CAPATF4; CEBPB (directAnnotation).
SP100metacluster_52.11ZNF184 (directAnnotation).
SP100taipale_tf_pairs__ATF4_TEF_RNMTGATGCAATN_CAPATF4; TEF (directAnnotation).
SP100transfac_pro__M05804ZBTB41 (inferredBy_Orthology).
SP100kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
SP100taipale__YY2_DBD_NNCCGCCATNW_reprYY2 (directAnnotation).
SP100cisbp__M02645ETS1 (directAnnotation).
SP100metacluster_166.5ERG; ETV2; FLI1 (directAnnotation).
SP100taipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
SP100transfac_pro__M00492STAT1 (directAnnotation).
SP100taipale_tf_pairs__ERF_HOXA3_RSCGGAWNNNNNNNYMATTA_CAP_reprERF; HOXA3 (directAnnotation).
SP100taipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
SP100taipale_tf_pairs__ETV5_EOMES_TNRCACCGGAWN_CAPEOMES; ETV5 (directAnnotation).
SP100transfac_pro__M04887TCF12 (directAnnotation).
SP100taipale_tf_pairs__FLI1_FOXI1_GAAAACCGAAAN_CAP_reprFLI1; FOXI1 (directAnnotation).
SP100hdpi__SSBP3SSBP3 (directAnnotation).
SP100tfdimers__MD00026IRF1; MYB (directAnnotation).
SP100transfac_pro__M04706RELA (directAnnotation).
SP100transfac_pro__M06493ZNF668 (inferredBy_Orthology).
SP100metacluster_2.6IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF2; IRF2; IRF2; IRF2; IRF2; IRF2; IRF2; IRF3; IRF3; IRF3; IRF3; IRF3; IRF3; IRF4; IRF4; IRF4; IRF4; IRF4; IRF5; IRF5; IRF5; IRF5; IRF5; IRF5; IRF5; IRF6; IRF7; IRF7; IRF7; IRF7; IRF7; IRF7; IRF7; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF9; IRF9; IRF9; IRF9; IRF9; IRF9; IRF9; STAT1; STAT2; STAT2; STAT2; STAT2; ZNF426; ZNF71 (directAnnotation). IRF1; IRF1; IRF3; IRF8 (inferredBy_Orthology).
SP100metacluster_5.1HIVEP1; HIVEP1; NFAT5; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB2; NFKB2; NFKB2; NFKB2; NFKB2; REL; REL; REL; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELB; RELB (directAnnotation). NFAT5; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB2; NFKB2; NFKB2; REL; REL; REL; REL; RELA; RELA; RELA; RELA; RELA; RELB; RELB; RELB (inferredBy_Orthology).
SP100hdpi__LARP1LARP1 (directAnnotation).
SP100metacluster_155.11SPZ1 (directAnnotation).
SP100tfdimers__MD00302IRF7; IRF8 (directAnnotation).
SP100metacluster_167.7IRF8 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."