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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SOX6

Summary for SOX6

Gene informationGene symbol

SOX6

Ensembl ID

ENSG00000110693

Entrez ID

55553

Gene nameSRY-box transcription factor 6
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P35712


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Dataset with differentially expressed gene: SOX6

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.3217134.92e-10

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.3315620.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreErythrocytes0.2877891.16e-02

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Expression of SOX6 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SOX6

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SOX6

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SOX6hsa-miR-499a-5p99.9817NM_001145811
SOX6hsa-miR-3529-3p99.9024NM_001145811
SOX6hsa-miR-808799.9004NM_001145811
SOX6hsa-miR-314899.7219NM_001145811
SOX6hsa-miR-365899.4883NM_001145811
SOX6hsa-miR-196a-1-3p99.3396NM_001145811
SOX6hsa-miR-4795-3p99.3206NM_001145811
SOX6hsa-miR-120699.2952NM_001145811
SOX6hsa-miR-19b-3p99.0456NM_001145811
SOX6hsa-miR-19a-3p99.0456NM_001145811
SOX6hsa-miR-548aj-3p98.7417NM_001145811
SOX6hsa-miR-548x-3p98.7417NM_001145811
SOX6hsa-miR-338-5p98.5831NM_001145811
SOX6hsa-miR-129998.5715NM_001145811
SOX6hsa-miR-3617-5p98.3676NM_001145811
SOX6hsa-miR-64198.3676NM_001145811
SOX6hsa-miR-548aq-3p98.3453NM_001145811
SOX6hsa-miR-548ae-3p98.3453NM_001145811
SOX6hsa-miR-182798.3449NM_001145811
SOX6hsa-miR-1213398.2965NM_001145811
SOX6hsa-miR-96-5p98.2127NM_001145811
SOX6hsa-miR-1252-3p98.121NM_001145811
SOX6hsa-miR-1271-5p98.0871NM_001145811
SOX6hsa-miR-548j-3p98.076NM_001145811
SOX6hsa-miR-548am-3p98.076NM_001145811
SOX6hsa-miR-548ah-3p98.076NM_001145811
SOX6hsa-miR-6766-3p98.0535NM_001145811
SOX6hsa-miR-219a-5p98.0535NM_001145811
SOX6hsa-miR-4782-3p98.0535NM_001145811
SOX6hsa-miR-875-3p97.7925NM_001145811
SOX6hsa-miR-302d-5p97.4184NM_001145811
SOX6hsa-miR-443297.4061NM_001145811
SOX6hsa-miR-126-5p97.2936NM_001145811
SOX6hsa-miR-181a-2-3p97.1556NM_001145811
SOX6hsa-miR-7154-5p97.084NM_001145811
SOX6hsa-miR-6511a-5p97.0028NM_001145811
SOX6hsa-miR-302b-5p96.8551NM_001145811
SOX6hsa-miR-607196.6042NM_001145811
SOX6hsa-miR-1910-3p96.5728NM_001145811
SOX6hsa-miR-442696.2664NM_001145811
SOX6hsa-miR-3680-3p96.0494NM_001145811
SOX6hsa-miR-449c-5p95.3646NM_001145811
SOX6hsa-miR-34b-5p95.3646NM_001145811
SOX6hsa-miR-548aw95.3534NM_001145811
SOX6hsa-miR-1910-5p95.3052NM_001145811
SOX6hsa-miR-4433b-5p95.1189NM_001145811
SOX6hsa-miR-3622b-5p94.6174NM_001145811
SOX6hsa-miR-612494.6096NM_001145811
SOX6hsa-miR-208b-3p94.5271NM_001145811
SOX6hsa-miR-208a-3p94.5271NM_001145811
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Motifs and transcription factors (TFs) regulating SOX6

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SOX6metacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
SOX6metacluster_141.4GLIS2 (directAnnotation).
SOX6jaspar__MA1460.1YY1 (inferredBy_Orthology).
SOX6metacluster_101.3MYB (directAnnotation).
SOX6flyfactorsurvey__pho_SOLEXA_F1-3YY1 (inferredBy_Orthology).
SOX6metacluster_33.8BRCA1; CHD2; CHD2; ETS1; NR3C1; ZBED1; ZBED1; ZBED1; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33 (directAnnotation). CHD2; ZBTB33 (inferredBy_Orthology).
SOX6metacluster_172.6CHD2; E2F1 (directAnnotation).
SOX6cisbp__M02645ETS1 (directAnnotation).
SOX6swissregulon__hs__GMEB2GMEB2 (directAnnotation).
SOX6hdpi__TIMELESSTIMELESS (directAnnotation).
SOX6taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
SOX6homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
SOX6taipale_tf_pairs__ETV2_SOX15_RSCGGAANNNNNNYWTTGT_CAP_reprETV2; SOX15 (directAnnotation).
SOX6transfac_pro__M06404ZNF497 (directAnnotation).
SOX6metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
SOX6kznf__ZNF343_Imbeault2017_OM_RCADEZNF343 (directAnnotation).
SOX6taipale_tf_pairs__GCM1_FIGLA_CASSTGNNNNNNNNNNTGCGGG_CAP_reprFIGLA; GCM1 (directAnnotation).
SOX6metacluster_181.1EGR2; GLI1; GLI1; GLI1; GLI1; GLI1; GLI1; GLI1; GLI1; GLI1; GLI2; GLI2; GLI2; GLI2; GLI2; GLI2; GLI2; GLI2; GLI2; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLIS1; ZBTB7A; ZBTB7A; ZBTB7B; ZBTB7B; ZBTB7B; ZBTB7C; ZFP2; ZIC1; ZIC1; ZIC1; ZIC2; ZIC2; ZIC3; ZNF449; ZNF71 (directAnnotation). GLI1; GLI1; GLI2; GLI2; GLI2; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; VPS72; ZIC3; ZXDA; ZXDA; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
SOX6taipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."