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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: SOX10

Summary for SOX10

Gene informationGene symbol

SOX10

Ensembl ID

ENSG00000100146

Entrez ID

6663

Gene nameSRY-box transcription factor 10
SynonymsDOM|SOX-10|WS2E|WS4
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: SOX10

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE164897_Vem

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenibNAMalignant cells-0.3604190.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.742350.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.4969080.00e+00

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Expression of SOX10 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SOX10

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

SOX10

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating SOX10

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SOX10hsa-miR-6783-3p97.8323NM_006941
SOX10hsa-miR-1343-3p96.8698NM_006941
SOX10hsa-miR-442493.4827NM_006941
SOX10hsa-miR-4677-3p93.2631NM_006941
SOX10hsa-miR-486-3p92.7158NM_006941
SOX10hsa-miR-608589.3495NM_006941
SOX10hsa-miR-6813-5p89.3408NM_006941
SOX10hsa-miR-6735-5p89.2458NM_006941
SOX10hsa-miR-6789-5p88.8452NM_006941
SOX10hsa-miR-6852-5p88.7681NM_006941
SOX10hsa-miR-7843-5p88.6453NM_006941
SOX10hsa-miR-477586.9771NM_006941
SOX10hsa-miR-4632-5p86.1213NM_006941
SOX10hsa-miR-4436b-3p85.9857NM_006941
SOX10hsa-miR-6879-5p85.9857NM_006941
SOX10hsa-miR-468885.9389NM_006941
SOX10hsa-miR-63785.7549NM_006941
SOX10hsa-miR-465785.6708NM_006941
SOX10hsa-miR-449185.6708NM_006941
SOX10hsa-miR-939-3p84.1261NM_006941
SOX10hsa-miR-6742-3p83.9169NM_006941
SOX10hsa-miR-590-3p83.2937NM_006941
SOX10hsa-miR-185-3p82.831NM_006941
SOX10hsa-miR-6864-5p82.5078NM_006941
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Motifs and transcription factors (TFs) regulating SOX10

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SOX10transfac_public__M00024E2F1 (directAnnotation).
SOX10transfac_public__M00040ATF2 (directAnnotation).
SOX10metacluster_27.20ZNF708; ZNF787; ZNF787; ZNF85 (directAnnotation).
SOX10taipale_tf_pairs__TEAD4_HOXB13_CYAATAAAATGYN_CAP_reprHOXB13; TEAD4 (directAnnotation).
SOX10transfac_pro__M05298OVOL3 (directAnnotation).
SOX10taipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
SOX10metacluster_161.4LHX9 (directAnnotation).
SOX10jaspar__MA1933.1SREBF2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
SOX10metacluster_153.3downMalignant cells

GSE164897_Vem

NA
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."