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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SOCS4

Summary for SOCS4

Gene informationGene symbol

SOCS4

Ensembl ID

ENSG00000180008

Entrez ID

122809

Gene namesuppressor of cytokine signaling 4
SynonymsSOCS7
Gene typeprotein_coding
UniProtAcc

Q8WXH5


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Dataset with differentially expressed gene: SOCS4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2977631.95e-31

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Expression of SOCS4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SOCS4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SOCS4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SOCS4hsa-miR-364695.9123NM_080867
SOCS4hsa-miR-450095.8021NM_080867
SOCS4hsa-miR-4477b95.1418NM_080867
SOCS4hsa-miR-316395.0774NM_080867
SOCS4hsa-miR-506-5p94.2527NM_080867
SOCS4hsa-miR-56893.8319NM_199421
SOCS4hsa-miR-94491.4388NM_080867
SOCS4hsa-let-7g-5p91.3629NM_080867
SOCS4hsa-let-7a-5p91.3629NM_080867
SOCS4hsa-let-7b-5p91.3629NM_080867
SOCS4hsa-miR-98-5p91.3629NM_080867
SOCS4hsa-let-7f-5p91.3629NM_080867
SOCS4hsa-let-7e-5p91.3629NM_080867
SOCS4hsa-let-7c-5p91.3629NM_080867
SOCS4hsa-let-7i-5p91.3629NM_080867
SOCS4hsa-miR-5197-3p91.13NM_199421
SOCS4hsa-miR-1212490.9788NM_080867
SOCS4hsa-miR-568090.7496NM_199421
SOCS4hsa-miR-1213690.3979NM_080867
SOCS4hsa-miR-651-3p90.0759NM_199421
SOCS4hsa-miR-183-3p90.073NM_080867
SOCS4hsa-miR-4762-3p89.9691NM_080867
SOCS4hsa-miR-129089.4855NM_080867
SOCS4hsa-miR-367489.206NM_199421
SOCS4hsa-let-7d-5p88.7909NM_080867
SOCS4hsa-miR-445888.7909NM_080867
SOCS4hsa-miR-60787.3351NM_080867
SOCS4hsa-miR-541-5p86.8745NM_199421
SOCS4hsa-miR-590-3p86.8701NM_199421
SOCS4hsa-miR-548c-3p85.5237NM_199421
SOCS4hsa-miR-1212085.3575NM_199421
SOCS4hsa-miR-290985.1246NM_199421
SOCS4hsa-miR-656-3p84.8637NM_199421
SOCS4hsa-miR-472984.5799NM_199421
SOCS4hsa-miR-205283.8413NM_199421
SOCS4hsa-miR-607483.5267NM_199421
SOCS4hsa-miR-7154-5p83.0954NM_080867
SOCS4hsa-miR-627-3p82.6476NM_080867
SOCS4hsa-miR-138-1-3p82.1834NM_080867
SOCS4hsa-miR-186-5p81.5322NM_199421
SOCS4hsa-miR-3679-3p81.4977NM_199421
SOCS4hsa-miR-311681.4058NM_199421
SOCS4hsa-miR-9-3p81.2774NM_199421
SOCS4hsa-miR-6876-5p81.0903NM_080867
SOCS4hsa-miR-447681.0903NM_080867
SOCS4hsa-miR-366280.8862NM_080867
SOCS4hsa-miR-4755-5p80.2804NM_080867
SOCS4hsa-miR-5006-3p80.2804NM_080867
SOCS4hsa-miR-5011-5p80.1833NM_199421
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Motifs and transcription factors (TFs) regulating SOCS4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SOCS4metacluster_135.11NR2C2 (directAnnotation).
SOCS4metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
SOCS4metacluster_144.3ZNF704; ZNF704 (directAnnotation).
SOCS4metacluster_7.13ZFX (directAnnotation).
SOCS4cisbp__M00968MTF2 (directAnnotation).
SOCS4metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
SOCS4metacluster_160.20JUND; PRDM15 (directAnnotation).
SOCS4cisbp__M00341PAX6 (directAnnotation).
SOCS4metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
SOCS4metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
SOCS4jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
SOCS4metacluster_61.1DEAF1; DEAF1 (directAnnotation).
SOCS4cisbp__M00788ZFY (inferredBy_Orthology).
SOCS4kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
SOCS4metacluster_175.1ZNF283 (directAnnotation).
SOCS4hdpi__ZNF304ZNF304 (directAnnotation).
SOCS4transfac_pro__M02844BCL6B (inferredBy_Orthology).
SOCS4metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
SOCS4metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
SOCS4transfac_pro__M01199TRIM28 (directAnnotation).
SOCS4kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
SOCS4metacluster_151.2ZNF23 (directAnnotation).
SOCS4transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
SOCS4transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
SOCS4transfac_pro__M03806ZBTB7C (directAnnotation).
SOCS4transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."