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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SMIM10L1

Summary for SMIM10L1

Gene informationGene symbol

SMIM10L1

Ensembl ID

ENSG00000262986

Entrez ID

100129361

Gene namesmall integral membrane protein 10 like 1
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P0DMW3


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Dataset with differentially expressed gene: SMIM10L1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2516882.67e-21

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.5191770.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.3593660.00e+00

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Expression of SMIM10L1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SMIM10L1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SMIM10L1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SMIM10L1hsa-miR-5011-5p97.9103NM_001271592
SMIM10L1hsa-miR-190a-3p97.3101NM_001271592
SMIM10L1hsa-miR-6809-3p90.7286NM_001271592
SMIM10L1hsa-miR-770288.9082NM_001271592
SMIM10L1hsa-miR-548d-3p88.7097NM_001271592
SMIM10L1hsa-miR-548h-3p88.7097NM_001271592
SMIM10L1hsa-miR-548ac88.7097NM_001271592
SMIM10L1hsa-miR-548z88.7097NM_001271592
SMIM10L1hsa-miR-548bb-3p88.7097NM_001271592
SMIM10L1hsa-miR-1295b-5p88.6734NM_001271592
SMIM10L1hsa-miR-4753-3p88.1939NM_001271592
SMIM10L1hsa-miR-5187-5p87.6288NM_001271592
SMIM10L1hsa-miR-1912-3p87.5861NM_001271592
SMIM10L1hsa-miR-205287.377NM_001271592
SMIM10L1hsa-miR-942-3p85.2876NM_001271592
SMIM10L1hsa-miR-314883.4511NM_001271592
SMIM10L1hsa-miR-1277-5p83.0908NM_001271592
SMIM10L1hsa-miR-7152-5p82.811NM_001271592
SMIM10L1hsa-miR-3074-5p82.7094NM_001271592
SMIM10L1hsa-miR-5580-3p82.4941NM_001271592
SMIM10L1hsa-miR-335-3p82.2386NM_001271592
SMIM10L1hsa-miR-7161-5p82.2133NM_001271592
SMIM10L1hsa-miR-806381.9491NM_001271592
SMIM10L1hsa-miR-181b-2-3p81.5778NM_001271592
SMIM10L1hsa-miR-442081.5778NM_001271592
SMIM10L1hsa-miR-181b-3p81.5778NM_001271592
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Motifs and transcription factors (TFs) regulating SMIM10L1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SMIM10L1metacluster_135.11NR2C2 (directAnnotation).
SMIM10L1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
SMIM10L1metacluster_160.20JUND; PRDM15 (directAnnotation).
SMIM10L1metacluster_198.3ZFP64 (directAnnotation).
SMIM10L1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
SMIM10L1kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
SMIM10L1metacluster_151.2ZNF23 (directAnnotation).
SMIM10L1metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
SMIM10L1swissregulon__hs__ELF2ELF2 (directAnnotation).
SMIM10L1taipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
SMIM10L1taipale_tf_pairs__HOXB2_ETV1_ACCGGAAATGA_CAPETV1; HOXB2 (directAnnotation).
SMIM10L1transfac_pro__M04748GABPA (directAnnotation).
SMIM10L1taipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAPERG; TEAD4 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."