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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SMARCC2

Summary for SMARCC2

Gene informationGene symbol

SMARCC2

Ensembl ID

ENSG00000139613

Entrez ID

6601

Gene nameSWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2
SynonymsBAF170|CRACC2|Rsc8
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: SMARCC2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.394683.49e-18

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.256190.00e+00

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Expression of SMARCC2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SMARCC2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SMARCC2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SMARCC2hsa-miR-4723-3p95.0163NM_003075
SMARCC2hsa-miR-6769b-3p95.0163NM_003075
SMARCC2hsa-miR-318395.0163NM_003075
SMARCC2hsa-miR-6515-5p93.6141NM_003075
SMARCC2hsa-miR-808592.3207NM_003075
SMARCC2hsa-miR-6731-5p92.3207NM_003075
SMARCC2hsa-miR-373-3p91.6642NM_001130420
SMARCC2hsa-miR-520c-3p91.6642NM_001130420
SMARCC2hsa-miR-372-3p91.6642NM_001130420
SMARCC2hsa-miR-520d-3p91.6642NM_001130420
SMARCC2hsa-miR-520e-3p91.6642NM_001130420
SMARCC2hsa-miR-520b-3p91.6642NM_001130420
SMARCC2hsa-miR-520a-3p91.6642NM_001130420
SMARCC2hsa-miR-317591.5899NM_001130420
SMARCC2hsa-miR-302b-3p91.1829NM_001130420
SMARCC2hsa-miR-302c-3p91.1829NM_001130420
SMARCC2hsa-miR-302a-3p91.1829NM_001130420
SMARCC2hsa-miR-302d-3p91.1829NM_001130420
SMARCC2hsa-miR-302e91.1829NM_001130420
SMARCC2hsa-miR-6763-5p90.3282NM_001130420
SMARCC2hsa-miR-3150a-3p90.3282NM_001130420
SMARCC2hsa-miR-7111-5p89.4963NM_003075
SMARCC2hsa-miR-6870-5p89.4963NM_003075
SMARCC2hsa-miR-4723-5p89.4963NM_003075
SMARCC2hsa-miR-569889.4963NM_003075
SMARCC2hsa-miR-5196-5p89.3515NM_001130420
SMARCC2hsa-miR-4747-5p89.3515NM_001130420
SMARCC2hsa-miR-3691-3p87.8341NM_003075
SMARCC2hsa-miR-447586.5136NM_001130420
SMARCC2hsa-miR-6797-5p86.3208NM_003075
SMARCC2hsa-miR-1249-5p86.3208NM_003075
SMARCC2hsa-miR-92a-2-5p85.8585NM_003075
SMARCC2hsa-miR-520f-3p85.6864NM_001130420
SMARCC2hsa-miR-3124-3p85.5809NM_001130420
SMARCC2hsa-miR-4680-5p85.3309NM_003075
SMARCC2hsa-miR-6810-5p83.8416NM_003075
SMARCC2hsa-miR-3928-3p83.7346NM_001130420
SMARCC2hsa-miR-472180.8584NM_003075
SMARCC2hsa-miR-449580.3795NM_001130420
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Motifs and transcription factors (TFs) regulating SMARCC2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SMARCC2swissregulon__hs__ETV6ETV6 (directAnnotation).
SMARCC2hocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
SMARCC2metacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
SMARCC2transfac_pro__M04794TAF1 (directAnnotation).
SMARCC2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
SMARCC2jaspar__MA0748.2YY2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."