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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SLITRK4

Summary for SLITRK4

Gene informationGene symbol

SLITRK4

Ensembl ID

ENSG00000179542

Entrez ID

139065

Gene nameSLIT and NTRK like family member 4
SynonymsDKFZp547M2010
Gene typeprotein_coding
UniProtAcc

Q8IW52


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Dataset with differentially expressed gene: SLITRK4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-3.536382.34e-06

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Expression of SLITRK4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SLITRK4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SLITRK4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SLITRK4hsa-miR-5011-5p99.9815NM_001184749
SLITRK4hsa-miR-5692a99.9189NM_001184749
SLITRK4hsa-miR-190a-3p99.7624NM_001184749
SLITRK4hsa-miR-392499.1166NM_001184749
SLITRK4hsa-miR-848599.0713NM_001184749
SLITRK4hsa-miR-6873-3p98.7088NM_001184749
SLITRK4hsa-miR-664a-3p98.4116NM_001184749
SLITRK4hsa-miR-520d-5p98.074NM_001184749
SLITRK4hsa-miR-524-5p98.074NM_001184749
SLITRK4hsa-miR-5003-3p97.7153NM_001184749
SLITRK4hsa-miR-329-5p96.9941NM_001184749
SLITRK4hsa-miR-394196.9764NM_001184749
SLITRK4hsa-miR-432896.7963NM_001184749
SLITRK4hsa-miR-337-3p96.6325NM_001184749
SLITRK4hsa-miR-361896.1984NM_001184749
SLITRK4hsa-miR-431095.3039NM_001184749
SLITRK4hsa-miR-60395.2954NM_001184749
SLITRK4hsa-miR-5002-5p95.243NM_001184749
SLITRK4hsa-miR-202-5p94.596NM_001184749
SLITRK4hsa-miR-7-2-3p94.4982NM_001184749
SLITRK4hsa-miR-182-5p94.0212NM_001184749
SLITRK4hsa-miR-302c-5p94.0026NM_001184749
SLITRK4hsa-miR-7-1-3p93.952NM_001184749
SLITRK4hsa-miR-806293.7581NM_001184749
SLITRK4hsa-miR-4762-3p93.5336NM_001184749
SLITRK4hsa-miR-4772-5p93.5233NM_001184749
SLITRK4hsa-miR-6852-3p93.2439NM_001184749
SLITRK4hsa-miR-7157-5p92.982NM_001184749
SLITRK4hsa-miR-340-5p92.5964NM_001184749
SLITRK4hsa-miR-390992.5436NM_001184749
SLITRK4hsa-miR-50792.5317NM_001184749
SLITRK4hsa-miR-16-1-3p92.2036NM_001184749
SLITRK4hsa-miR-3680-3p92.1668NM_001184749
SLITRK4hsa-miR-124-3p91.8893NM_001184749
SLITRK4hsa-miR-506-3p91.8893NM_001184749
SLITRK4hsa-miR-55791.8804NM_001184749
SLITRK4hsa-miR-548aw91.7153NM_001184749
SLITRK4hsa-miR-374b-3p91.5136NM_001184749
SLITRK4hsa-miR-144-3p91.3377NM_001184749
SLITRK4hsa-miR-4652-3p91.1728NM_001184749
SLITRK4hsa-miR-3065-5p91.1173NM_001184749
SLITRK4hsa-miR-442291.0206NM_001184749
SLITRK4hsa-miR-548e-5p90.9221NM_001184749
SLITRK4hsa-miR-561-3p90.8912NM_001184749
SLITRK4hsa-miR-4743-3p90.2583NM_001184749
SLITRK4hsa-miR-153-5p90.1007NM_001184749
SLITRK4hsa-miR-19a-5p89.7076NM_001184749
SLITRK4hsa-miR-19b-1-5p89.7076NM_001184749
SLITRK4hsa-miR-19b-2-5p89.7076NM_001184749
SLITRK4hsa-miR-7852-3p89.6164NM_001184749
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Motifs and transcription factors (TFs) regulating SLITRK4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."