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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SLC40A1

Summary for SLC40A1

Gene informationGene symbol

SLC40A1

Ensembl ID

ENSG00000138449

Entrez ID

30061

Gene namesolute carrier family 40 member 1
SynonymsFPN1|HFE4|IREG1|MTP1|SLC11A3
Gene typeprotein_coding
UniProtAcc

Q9NP59


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Dataset with differentially expressed gene: SLC40A1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostMono/Macro-0.4618682.34e-16

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostMono/Macro-1.554821.94e-03

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.4539011.04e-19

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes0.2641844.61e-26

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Expression of SLC40A1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SLC40A1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SLC40A1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SLC40A1hsa-miR-17-5p99.4526NM_014585
SLC40A1hsa-miR-20a-5p99.4526NM_014585
SLC40A1hsa-miR-519d-3p99.4526NM_014585
SLC40A1hsa-miR-93-5p99.4526NM_014585
SLC40A1hsa-miR-106a-5p99.4526NM_014585
SLC40A1hsa-miR-106b-5p99.4526NM_014585
SLC40A1hsa-miR-20b-5p99.4526NM_014585
SLC40A1hsa-miR-526b-3p98.7356NM_014585
SLC40A1hsa-miR-302e94.8106NM_014585
SLC40A1hsa-miR-524-5p94.7028NM_014585
SLC40A1hsa-miR-520d-5p94.7028NM_014585
SLC40A1hsa-miR-628-3p94.3342NM_014585
SLC40A1hsa-miR-118392.4934NM_014585
SLC40A1hsa-miR-568092.3398NM_014585
SLC40A1hsa-miR-520d-3p92.1651NM_014585
SLC40A1hsa-miR-520a-3p92.1651NM_014585
SLC40A1hsa-miR-302b-3p92.1651NM_014585
SLC40A1hsa-miR-302d-3p92.1651NM_014585
SLC40A1hsa-miR-372-3p92.1651NM_014585
SLC40A1hsa-miR-302c-3p92.1651NM_014585
SLC40A1hsa-miR-302a-3p92.1651NM_014585
SLC40A1hsa-miR-520e-3p92.1651NM_014585
SLC40A1hsa-miR-520c-3p92.1651NM_014585
SLC40A1hsa-miR-520b-3p92.1651NM_014585
SLC40A1hsa-miR-10393-5p92.1301NM_014585
SLC40A1hsa-miR-17-3p91.473NM_014585
SLC40A1hsa-miR-373-3p91.1175NM_014585
SLC40A1hsa-miR-539-3p90.1595NM_014585
SLC40A1hsa-miR-5681a89.265NM_014585
SLC40A1hsa-miR-485-3p88.9675NM_014585
SLC40A1hsa-miR-101-5p87.6553NM_014585
SLC40A1hsa-miR-4680-3p86.6762NM_014585
SLC40A1hsa-miR-4659a-3p86.2215NM_014585
SLC40A1hsa-miR-4659b-3p86.2215NM_014585
SLC40A1hsa-miR-55385.2791NM_014585
SLC40A1hsa-miR-519b-3p84.9429NM_014585
SLC40A1hsa-miR-519a-3p84.9429NM_014585
SLC40A1hsa-miR-519c-3p84.9429NM_014585
SLC40A1hsa-miR-6826-5p84.6871NM_014585
SLC40A1hsa-miR-1-5p82.2065NM_014585
SLC40A1hsa-miR-469882.0069NM_014585
SLC40A1hsa-miR-806382.0069NM_014585
SLC40A1hsa-miR-6818-5p80.1442NM_014585
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Motifs and transcription factors (TFs) regulating SLC40A1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SLC40A1swissregulon__hs__HBP1HBP1 (directAnnotation).
SLC40A1transfac_pro__M01298MECP2 (directAnnotation).
SLC40A1transfac_pro__M06099ZNF14 (directAnnotation).
SLC40A1transfac_pro__M01973PLAG1 (directAnnotation).
SLC40A1transfac_public__M00051NFKB1 (directAnnotation).
SLC40A1tfdimers__MD00046GATA1; GATA2; GATA3; GATA4; GATA5; GATA6; SMAD4 (directAnnotation).
SLC40A1transfac_pro__M06071ZNF814 (directAnnotation).
SLC40A1homer__ATTGCGCAAC_CEBPCEBPB (inferredBy_Orthology).
SLC40A1taipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
SLC40A1metacluster_143.13ZBTB7A (directAnnotation).
SLC40A1taipale_tf_pairs__TEAD4_CEBPD_RGWATGYNNTTRCGYAAN_CAPCEBPD; TEAD4 (directAnnotation).
SLC40A1transfac_pro__M05845ZSCAN29 (directAnnotation).
SLC40A1taipale__YY2_DBD_NNCCGCCATNW_reprYY2 (directAnnotation).
SLC40A1taipale_tf_pairs__ETV2_CEBPD_RSCGGANNTTGCGYAAN_CAP_reprCEBPD; ETV2 (directAnnotation).
SLC40A1metacluster_52.13LEF1; LEF1; LEF1; LEF1; TCF7; TCF7; TCF7L1; TCF7L1 (directAnnotation).
SLC40A1taipale_tf_pairs__ERF_CEBPD_RSMGGAANTTGCGYAAN_CAPCEBPD; ERF (directAnnotation).
SLC40A1tfdimers__MD00129CRX; NKX3-2 (directAnnotation).
SLC40A1hdpi__FLI1FLI1 (directAnnotation).
SLC40A1taipale_tf_pairs__ETV2_PAX5_ACCGGANNTACGCNNNNNYR_CAPETV2; PAX5 (directAnnotation).
SLC40A1taipale_tf_pairs__FLI1_CEBPD_RNCGGANNTTGCGCAAN_CAPCEBPD; FLI1 (directAnnotation).
SLC40A1hdpi__ETV4ETV4 (directAnnotation).
SLC40A1taipale_tf_pairs__ELK1_PAX5_RSCGGAACYACGCWYSANTG_CAP_reprELK1; PAX5 (directAnnotation).
SLC40A1swissregulon__hs__SPI1SPI1 (directAnnotation).
SLC40A1taipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
SLC40A1swissregulon__hs__ELF2ELF2 (directAnnotation).
SLC40A1tfdimers__MD00158DBP; ZNF354C (directAnnotation).
SLC40A1transfac_pro__M06165ZNF570 (inferredBy_Orthology).
SLC40A1transfac_pro__M06265ZNF791 (directAnnotation).
SLC40A1transfac_pro__M01105ZNF350 (directAnnotation).
SLC40A1transfac_pro__M06610ZNF764 (directAnnotation).
SLC40A1kznf__CTCF_Rhee2011.3_ChIP-exoCTCF (directAnnotation).
SLC40A1taipale_tf_pairs__ETV2_DLX2_RCCGGAANNNNNNYAATTA_CAP_reprDLX2; ETV2 (directAnnotation).
SLC40A1homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
SLC40A1metacluster_22.20MAFG (directAnnotation).
SLC40A1metacluster_80.6ZIC4 (directAnnotation).
SLC40A1metacluster_22.12NFE2; NFE2L1 (directAnnotation).
SLC40A1metacluster_22.11NFE2 (directAnnotation).
SLC40A1transfac_pro__M02933ZBTB14 (inferredBy_Orthology).
SLC40A1homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
SLC40A1dbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
SLC40A1kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."