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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SLC25A40

Summary for SLC25A40

Gene informationGene symbol

SLC25A40

Ensembl ID

ENSG00000075303

Entrez ID

55972

Gene namesolute carrier family 25 member 40
SynonymsMCFP
Gene typeprotein_coding
UniProtAcc

Q8TBP6


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Dataset with differentially expressed gene: SLC25A40

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells3.058213.30e-03

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Expression of SLC25A40 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SLC25A40

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SLC25A40

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SLC25A40hsa-miR-5011-5p98.169NM_018843
SLC25A40hsa-miR-494-3p96.3751NM_018843
SLC25A40hsa-miR-1-5p96.1337NM_018843
SLC25A40hsa-miR-368595.4431NM_018843
SLC25A40hsa-miR-1212394.9955NM_018843
SLC25A40hsa-miR-218-2-3p93.5692NM_018843
SLC25A40hsa-miR-428993.226NM_018843
SLC25A40hsa-miR-428292.8999NM_018843
SLC25A40hsa-miR-190a-3p91.9231NM_018843
SLC25A40hsa-miR-4684-3p90.9689NM_018843
SLC25A40hsa-miR-548c-3p90.5967NM_018843
SLC25A40hsa-miR-447388.7559NM_018843
SLC25A40hsa-miR-1277-5p87.9367NM_018843
SLC25A40hsa-miR-664a-3p87.8776NM_018843
SLC25A40hsa-miR-320185.9213NM_018843
SLC25A40hsa-miR-200a-5p85.8537NM_018843
SLC25A40hsa-miR-200b-5p85.8537NM_018843
SLC25A40hsa-miR-5089-3p84.3775NM_018843
SLC25A40hsa-miR-10523-5p84.2957NM_018843
SLC25A40hsa-miR-479183.7635NM_018843
SLC25A40hsa-miR-4781-3p81.3255NM_018843
SLC25A40hsa-miR-183-3p81.2102NM_018843
SLC25A40hsa-miR-568080.4173NM_018843
SLC25A40hsa-miR-797880.3354NM_018843
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Motifs and transcription factors (TFs) regulating SLC25A40

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SLC25A40hdpi__HIP2UBE2K (directAnnotation).
SLC25A40transfac_pro__M04893TAF1 (directAnnotation).
SLC25A40metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
SLC25A40kznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."