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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SLC19A2

Summary for SLC19A2

Gene informationGene symbol

SLC19A2

Ensembl ID

ENSG00000117479

Entrez ID

10560

Gene namesolute carrier family 19 member 2
SynonymsThT1|THTR1|TRMA
Gene typeprotein_coding
UniProtAcc

O60779


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Dataset with differentially expressed gene: SLC19A2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.3119831.82e-13

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Expression of SLC19A2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SLC19A2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SLC19A2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SLC19A2hsa-miR-1213698.4416NM_001319667
SLC19A2hsa-miR-371495.8445NM_001319667
SLC19A2hsa-miR-205-5p94.1847NM_006996
SLC19A2hsa-miR-4755-5p93.5793NM_006996
SLC19A2hsa-miR-5006-3p93.5793NM_006996
SLC19A2hsa-miR-128493.4988NM_006996
SLC19A2hsa-miR-4799-5p93.0408NM_001319667
SLC19A2hsa-miR-129792.9011NM_001319667
SLC19A2hsa-miR-5585-3p92.7823NM_001319667
SLC19A2hsa-miR-26b-5p92.4701NM_001319667
SLC19A2hsa-miR-26a-5p92.4701NM_001319667
SLC19A2hsa-miR-6828-5p92.257NM_001319667
SLC19A2hsa-miR-6719-3p91.7046NM_001319667
SLC19A2hsa-miR-10527-5p91.6465NM_006996
SLC19A2hsa-miR-446591.5361NM_001319667
SLC19A2hsa-miR-3529-3p91.3264NM_006996
SLC19A2hsa-miR-5692a90.9952NM_001319667
SLC19A2hsa-miR-63390.535NM_006996
SLC19A2hsa-miR-3678-3p90.4619NM_001319667
SLC19A2hsa-miR-101-3p88.4659NM_001319667
SLC19A2hsa-miR-127988.0793NM_006996
SLC19A2hsa-miR-568087.9905NM_006996
SLC19A2hsa-miR-7-2-3p87.5923NM_001319667
SLC19A2hsa-miR-330-3p87.5744NM_006996
SLC19A2hsa-miR-479487.223NM_006996
SLC19A2hsa-miR-548ai87.1453NM_006996
SLC19A2hsa-miR-570-5p87.1453NM_006996
SLC19A2hsa-miR-5196-5p86.9438NM_001319667
SLC19A2hsa-miR-4747-5p86.9438NM_001319667
SLC19A2hsa-miR-548c-3p86.712NM_001319667
SLC19A2hsa-miR-548x-3p85.5473NM_006996
SLC19A2hsa-miR-548aj-3p85.5473NM_006996
SLC19A2hsa-miR-664a-5p85.3408NM_006996
SLC19A2hsa-miR-335-3p84.8474NM_001319667
SLC19A2hsa-miR-7-1-3p84.0989NM_001319667
SLC19A2hsa-miR-200a-3p83.3055NM_006996
SLC19A2hsa-miR-141-3p83.3055NM_006996
SLC19A2hsa-miR-548p83.3022NM_006996
SLC19A2hsa-miR-548ah-3p83.2983NM_006996
SLC19A2hsa-miR-548aq-3p83.2983NM_006996
SLC19A2hsa-miR-548j-3p83.2983NM_006996
SLC19A2hsa-miR-548ae-3p83.2983NM_006996
SLC19A2hsa-miR-548am-3p83.2983NM_006996
SLC19A2hsa-miR-569783.0955NM_001319667
SLC19A2hsa-miR-316382.5459NM_001319667
SLC19A2hsa-miR-5007-3p82.493NM_006996
SLC19A2hsa-miR-9-5p81.9356NM_001319667
SLC19A2hsa-miR-126-5p80.7243NM_006996
SLC19A2hsa-miR-330-5p80.3519NM_006996
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Motifs and transcription factors (TFs) regulating SLC19A2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SLC19A2dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."