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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: SIK1

Summary for SIK1

Gene informationGene symbol

SIK1

Ensembl ID

ENSG00000142178

Entrez ID

150094

Gene namesalt inducible kinase 1
Synonymsmsk|SNF1LK
Gene typeprotein_coding
UniProtAcc

P57059


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Dataset with differentially expressed gene: SIK1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.2823511.33e-09

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells0.5568831.09e-31

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Expression of SIK1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SIK1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SIK1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SIK1hsa-miR-848598.4363NM_173354
SIK1hsa-miR-311996.9514NM_173354
SIK1hsa-miR-4711-3p94.0527NM_173354
SIK1hsa-miR-137-3p92.8842NM_173354
SIK1hsa-miR-15a-5p92.8617NM_173354
SIK1hsa-miR-148b-3p91.7541NM_173354
SIK1hsa-miR-148a-3p91.7541NM_173354
SIK1hsa-miR-152-3p91.7541NM_173354
SIK1hsa-miR-15b-5p91.1236NM_173354
SIK1hsa-miR-16-5p91.1236NM_173354
SIK1hsa-miR-6838-5p91.1236NM_173354
SIK1hsa-miR-195-5p91.1236NM_173354
SIK1hsa-miR-424-5p90.5422NM_173354
SIK1hsa-miR-497-5p90.5422NM_173354
SIK1hsa-miR-141-3p85.7181NM_173354
SIK1hsa-miR-200a-3p85.7181NM_173354
SIK1hsa-miR-6875-3p82.6505NM_173354
SIK1hsa-miR-548ar-3p82.2224NM_173354
SIK1hsa-miR-9-5p81.6414NM_173354
SIK1hsa-miR-998581.0942NM_173354
SIK1hsa-miR-27a-3p81.0942NM_173354
SIK1hsa-miR-27b-3p81.0942NM_173354
SIK1hsa-miR-511-5p80.9603NM_173354
SIK1hsa-miR-397780.7072NM_173354
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Motifs and transcription factors (TFs) regulating SIK1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SIK1hdpi__NFIXNFIX (directAnnotation).
SIK1metacluster_153.4SOX12; SOX14; SRY (directAnnotation). SOX5 (inferredBy_Orthology).
SIK1transfac_pro__M02896SPI1 (inferredBy_Orthology).
SIK1cisbp__M00161FOXJ1 (inferredBy_Orthology).
SIK1taipale_tf_pairs__HOXB13_ONECUT2_NNNRTAAAWATYGAYY_CAPHOXB13; ONECUT2 (directAnnotation).
SIK1metacluster_134.7FOXD2; FOXG1; FOXI1; FOXJ2; FOXJ2; FOXJ3; FOXJ3; FOXK1; FOXK1; FOXK2; FOXO4; FOXO6; FOXP2 (directAnnotation). FOXC1; FOXO1; FOXO6 (inferredBy_Orthology).
SIK1transfac_pro__M07270TEAD4 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
SIK1"Dabrafenib"

DB08912

small molecule
SIK1"Fostamatinib"

DB12010

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."