DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: SHPRH

Summary for SHPRH

Gene informationGene symbol

SHPRH

Ensembl ID

ENSG00000146414

Entrez ID

257218

Gene nameSNF2 histone linker PHD RING helicase
SynonymsbA545I5.2|FLJ90837|KIAA2023
Gene typeprotein_coding
UniProtAcc

NA


Top

Dataset with differentially expressed gene: SHPRH

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.4981241.20e-02

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.359984.82e-28

Top

Expression of SHPRH in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to SHPRH

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating SHPRH

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SHPRHhsa-miR-316398.9808NM_001042683
SHPRHhsa-miR-498-3p98.8434NM_001042683
SHPRHhsa-miR-374c-5p98.7855NM_001042683
SHPRHhsa-miR-655-3p98.7855NM_001042683
SHPRHhsa-miR-200a-5p97.5553NM_173082
SHPRHhsa-miR-200b-5p97.5553NM_173082
SHPRHhsa-miR-6739-5p97.0927NM_173082
SHPRHhsa-miR-5582-3p96.7289NM_001042683
SHPRHhsa-miR-6733-5p95.2806NM_173082
SHPRHhsa-miR-4716-5p94.9645NM_173082
SHPRHhsa-miR-186-5p94.5183NM_001042683
SHPRHhsa-miR-315394.3864NM_173082
SHPRHhsa-miR-4789-3p93.8437NM_173082
SHPRHhsa-miR-6507-3p92.9184NM_001042683
SHPRHhsa-miR-190a-3p92.292NM_173082
SHPRHhsa-miR-46690.2636NM_173082
SHPRHhsa-miR-590-3p89.6384NM_173082
SHPRHhsa-miR-548x-3p88.6619NM_173082
SHPRHhsa-miR-548aj-3p88.6619NM_173082
SHPRHhsa-miR-130288.5042NM_001042683
SHPRHhsa-miR-3913-5p88.335NM_001042683
SHPRHhsa-miR-29a-3p88.2342NM_001042683
SHPRHhsa-miR-29c-3p88.2342NM_001042683
SHPRHhsa-miR-29b-3p88.2342NM_001042683
SHPRHhsa-miR-312288.2186NM_001042683
SHPRHhsa-miR-60087.8252NM_173082
SHPRHhsa-miR-329-5p87.8019NM_173082
SHPRHhsa-miR-429887.1417NM_001042683
SHPRHhsa-miR-380-3p87.1128NM_173082
SHPRHhsa-miR-144-3p86.7208NM_001042683
SHPRHhsa-miR-10397-3p86.1337NM_001042683
SHPRHhsa-miR-580-5p85.3774NM_173082
SHPRHhsa-miR-122-5p84.8651NM_001042683
SHPRHhsa-miR-7161-3p84.7217NM_001042683
SHPRHhsa-miR-606984.3424NM_173082
SHPRHhsa-miR-548ar-3p84.3259NM_001042683
SHPRHhsa-miR-6854-5p84.0964NM_173082
SHPRHhsa-miR-426183.1727NM_001042683
SHPRHhsa-miR-548ae-3p82.8012NM_173082
SHPRHhsa-miR-548j-3p82.8012NM_173082
SHPRHhsa-miR-548ah-3p82.8012NM_173082
SHPRHhsa-miR-548aq-3p82.8012NM_173082
SHPRHhsa-miR-548am-3p82.8012NM_173082
SHPRHhsa-miR-568882.7745NM_173082
SHPRHhsa-miR-495-3p82.7745NM_173082
SHPRHhsa-miR-671-5p82.6968NM_173082
SHPRHhsa-miR-548c-3p82.4661NM_001042683
SHPRHhsa-miR-147b-5p82.3775NM_001042683
SHPRHhsa-miR-374a-5p82.2462NM_173082
SHPRHhsa-miR-374b-5p81.7796NM_173082
Page: 1 2

Top

Motifs and transcription factors (TFs) regulating SHPRH

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SHPRHmetacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
SHPRHhocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
SHPRHtransfac_pro__M04617ZBTB7A (directAnnotation).
SHPRHmetacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
SHPRHtaipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
SHPRHtransfac_pro__M07387ZBTB7A (directAnnotation).
SHPRHtransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
SHPRHtransfac_pro__M00716ZBTB14 (directAnnotation).
SHPRHhdpi__HIP2UBE2K (directAnnotation).
SHPRHtransfac_pro__M04893TAF1 (directAnnotation).
SHPRHtransfac_pro__M03876ZBTB33 (directAnnotation).
SHPRHmetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
SHPRHkznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
SHPRHmetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
SHPRHhomer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
SHPRHtaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."