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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SHANK2

Summary for SHANK2

Gene informationGene symbol

SHANK2

Ensembl ID

ENSG00000162105

Entrez ID

22941

Gene nameSH3 and multiple ankyrin repeat domains 2
SynonymsCORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3
Gene typeprotein_coding
UniProtAcc

Q9UPX8


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Dataset with differentially expressed gene: SHANK2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells3.273132.40e-05

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Expression of SHANK2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SHANK2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SHANK2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SHANK2hsa-miR-218-5p98.6883NM_012309
SHANK2hsa-miR-314897.5211NM_012309
SHANK2hsa-miR-392697.4639NM_012309
SHANK2hsa-miR-6516-5p97.2449NM_012309
SHANK2hsa-miR-6867-5p95.6095NM_012309
SHANK2hsa-miR-569095.3567NM_012309
SHANK2hsa-miR-425195.0161NM_012309
SHANK2hsa-miR-202-3p94.6981NM_012309
SHANK2hsa-miR-7-5p94.6968NM_012309
SHANK2hsa-miR-10399-5p94.4387NM_012309
SHANK2hsa-miR-6504-3p94.4387NM_012309
SHANK2hsa-miR-4684-5p93.8786NM_012309
SHANK2hsa-miR-3692-3p93.8572NM_012309
SHANK2hsa-miR-301b-3p93.7477NM_012309
SHANK2hsa-miR-4704-3p93.4719NM_012309
SHANK2hsa-miR-454-3p93.1508NM_012309
SHANK2hsa-miR-429592.7234NM_012309
SHANK2hsa-miR-130b-3p92.7234NM_012309
SHANK2hsa-miR-301a-3p92.7234NM_012309
SHANK2hsa-miR-366692.7234NM_012309
SHANK2hsa-miR-130a-3p92.7234NM_012309
SHANK2hsa-miR-4701-5p92.6499NM_012309
SHANK2hsa-miR-58892.6499NM_012309
SHANK2hsa-miR-619-3p91.7643NM_012309
SHANK2hsa-miR-569890.9168NM_012309
SHANK2hsa-miR-607989.7346NM_012309
SHANK2hsa-miR-656-5p89.7306NM_012309
SHANK2hsa-miR-1273h-3p89.6533NM_012309
SHANK2hsa-miR-3678-3p89.5398NM_012309
SHANK2hsa-miR-11181-3p89.3362NM_012309
SHANK2hsa-miR-76589.3362NM_012309
SHANK2hsa-miR-651-3p88.7721NM_012309
SHANK2hsa-miR-4716-5p88.474NM_012309
SHANK2hsa-miR-302f88.239NM_012309
SHANK2hsa-miR-7111-5p87.8149NM_012309
SHANK2hsa-miR-6870-5p87.8149NM_012309
SHANK2hsa-miR-4723-5p87.8149NM_012309
SHANK2hsa-miR-519a-2-5p87.6903NM_012309
SHANK2hsa-miR-520b-5p87.6903NM_012309
SHANK2hsa-miR-7114-5p87.4776NM_012309
SHANK2hsa-miR-4671-3p86.9383NM_012309
SHANK2hsa-miR-190a-5p86.8568NM_012309
SHANK2hsa-miR-190b-5p86.8568NM_012309
SHANK2hsa-miR-6874-3p86.5938NM_012309
SHANK2hsa-miR-3692-5p86.5889NM_012309
SHANK2hsa-miR-34686.5529NM_012309
SHANK2hsa-miR-506-3p86.399NM_012309
SHANK2hsa-miR-124-3p86.399NM_012309
SHANK2hsa-miR-148b-5p86.3033NM_012309
SHANK2hsa-miR-6852-3p85.6838NM_012309
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Motifs and transcription factors (TFs) regulating SHANK2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."