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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SETD2

Summary for SETD2

Gene informationGene symbol

SETD2

Ensembl ID

ENSG00000181555

Entrez ID

29072

Gene nameSET domain containing 2, histone lysine methyltransferase
SynonymsFLJ23184|HIF-1|HYPB|KIAA1732|KMT3A
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: SETD2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.2943420.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.3076920.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.360072.80e-45

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.4171570.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.2501040.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.2612610.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4207961.10e-34

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Expression of SETD2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SETD2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SETD2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SETD2hsa-miR-545-5p96.9704NM_014159
SETD2hsa-miR-55995.6023NM_014159
SETD2hsa-miR-548i94.1107NM_014159
SETD2hsa-miR-548ab94.1107NM_014159
SETD2hsa-miR-6792-5p94.0746NM_014159
SETD2hsa-miR-548ak93.6559NM_014159
SETD2hsa-miR-548bb-5p93.6559NM_014159
SETD2hsa-miR-548ap-5p93.6559NM_014159
SETD2hsa-miR-548ar-5p93.6559NM_014159
SETD2hsa-miR-548as-5p93.6559NM_014159
SETD2hsa-miR-548c-5p93.6559NM_014159
SETD2hsa-miR-548aq-5p93.6559NM_014159
SETD2hsa-miR-548b-5p93.6559NM_014159
SETD2hsa-miR-548ad-5p93.6559NM_014159
SETD2hsa-miR-548a-5p93.6559NM_014159
SETD2hsa-miR-548d-5p93.6559NM_014159
SETD2hsa-miR-548o-5p93.6559NM_014159
SETD2hsa-miR-548w93.6559NM_014159
SETD2hsa-miR-548y93.6559NM_014159
SETD2hsa-miR-548ay-5p93.6559NM_014159
SETD2hsa-miR-548h-5p93.6559NM_014159
SETD2hsa-miR-548ae-5p93.6559NM_014159
SETD2hsa-miR-548am-5p93.6559NM_014159
SETD2hsa-miR-548au-5p93.6559NM_014159
SETD2hsa-miR-548j-5p93.6559NM_014159
SETD2hsa-miR-7-1-3p92.7667NM_014159
SETD2hsa-miR-7-2-3p92.7667NM_014159
SETD2hsa-miR-126192.2018NM_014159
SETD2hsa-miR-5000-5p91.6322NM_014159
SETD2hsa-miR-1213690.3666NM_014159
SETD2hsa-miR-6500-3p89.3838NM_014159
SETD2hsa-miR-4722-5p88.5969NM_014159
SETD2hsa-miR-450387.403NM_014159
SETD2hsa-miR-369-3p87.1567NM_014159
SETD2hsa-miR-6823-5p87.0632NM_014159
SETD2hsa-miR-548ah-5p85.6127NM_014159
SETD2hsa-miR-360985.6127NM_014159
SETD2hsa-miR-548aa85.4815NM_014159
SETD2hsa-miR-548ap-3p85.4815NM_014159
SETD2hsa-miR-548t-3p85.4815NM_014159
SETD2hsa-miR-548e-5p84.3039NM_014159
SETD2hsa-miR-222-5p81.7273NM_014159
SETD2hsa-miR-7108-5p80.7537NM_014159
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Motifs and transcription factors (TFs) regulating SETD2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SETD2metacluster_135.11NR2C2 (directAnnotation).
SETD2metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
SETD2tfdimers__MD00038TFAP2C (directAnnotation).
SETD2metacluster_144.3ZNF704; ZNF704 (directAnnotation).
SETD2metacluster_7.13ZFX (directAnnotation).
SETD2kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
SETD2cisbp__M00968MTF2 (directAnnotation).
SETD2metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
SETD2metacluster_160.20JUND; PRDM15 (directAnnotation).
SETD2cisbp__M00341PAX6 (directAnnotation).
SETD2metacluster_198.3ZFP64 (directAnnotation).
SETD2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
SETD2metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
SETD2jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
SETD2metacluster_61.1DEAF1; DEAF1 (directAnnotation).
SETD2cisbp__M00788ZFY (inferredBy_Orthology).
SETD2kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
SETD2metacluster_175.1ZNF283 (directAnnotation).
SETD2hdpi__ZNF304ZNF304 (directAnnotation).
SETD2transfac_pro__M02844BCL6B (inferredBy_Orthology).
SETD2metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
SETD2metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
SETD2transfac_pro__M01199TRIM28 (directAnnotation).
SETD2kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
SETD2metacluster_151.2ZNF23 (directAnnotation).
SETD2transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
SETD2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
SETD2transfac_pro__M03806ZBTB7C (directAnnotation).
SETD2transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
SETD2transfac_pro__M02913SP140 (inferredBy_Orthology).
SETD2jaspar__MA0748.2YY2 (directAnnotation).
SETD2transfac_pro__M01090SMAD9 (inferredBy_Orthology).
SETD2transfac_pro__M01088DEAF1 (inferredBy_Orthology).
SETD2flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
SETD2transfac_pro__M00430E2F1 (directAnnotation).
SETD2metacluster_126.3LIN28B; LIN28B (directAnnotation).
SETD2transfac_pro__M04893TAF1 (directAnnotation).
SETD2homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
SETD2transfac_pro__M02865GMEB1 (inferredBy_Orthology).
SETD2transfac_pro__M08894OVOL1; OVOL2 (directAnnotation).
SETD2hdpi__HIP2UBE2K (directAnnotation).
SETD2kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
SETD2hdpi__TIMELESSTIMELESS (directAnnotation).
SETD2idmmpmm__MadSMAD9 (inferredBy_Orthology).
SETD2metacluster_191.5SPDEF (inferredBy_Orthology).
SETD2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
SETD2transfac_pro__M00938E2F1 (directAnnotation).
SETD2transfac_pro__M01238DEAF1 (inferredBy_Orthology).
SETD2taipale_cyt_meth__ZBTB37_NYACCGCRNNYACCGYR_eDBD_meth_reprZBTB37 (directAnnotation).
SETD2dbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."