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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SET

Summary for SET

Gene informationGene symbol

SET

Ensembl ID

ENSG00000119335

Entrez ID

6418

Gene nameSET nuclear proto-oncogene
Synonyms2PP2A|IGAAD|IPP2A2|PHAPII|TAF-I|TAF-IBETA
Gene typeprotein_coding
UniProtAcc

Q01105


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Dataset with differentially expressed gene: SET

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.8384610.00e+00

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells0.2857419.22e-22

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostB cells0.30280.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostProgenitors0.5861835.05e-04

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostcDCs0.3671234.80e-07

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD8+ T cells0.334430.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostCD4+ T cells-0.2564650.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells-0.4217891.37e-17

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD8+ T cells0.4034491.75e-04

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.481552.16e-20

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.6043510.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreCD8+ T cells0.2637731.01e-40

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.4358440.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.3951750.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.3089824.42e-40

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreErythrocytes-0.3069829.24e-04

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells-1.285153.73e-07

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.2741460.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.3626925.00e-25

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.2558253.57e-18

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.4979650.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.4591530.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.3770854.14e-37

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells0.6081450.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells0.510330.00e+00

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Expression of SET in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SET

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SET

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SEThsa-miR-1185-1-3p99.2448NM_001122821
SEThsa-let-7f-2-3p99.2448NM_001122821
SEThsa-miR-1185-2-3p99.2448NM_001122821
SEThsa-miR-7151-5p97.1516NM_001122821
SEThsa-miR-3613-3p96.692NM_001122821
SEThsa-miR-589-5p94.0676NM_001122821
SEThsa-miR-312393.8146NM_001122821
SEThsa-miR-6755-3p93.5571NM_001122821
SEThsa-miR-6764-5p92.2252NM_001122821
SEThsa-miR-4713-5p92.1992NM_001122821
SEThsa-miR-1915-3p91.808NM_001122821
SEThsa-miR-767-3p91.7655NM_001122821
SEThsa-miR-6873-5p90.2058NM_001122821
SEThsa-miR-4774-3p90.1391NM_001122821
SEThsa-miR-3679-3p90.1241NM_001122821
SEThsa-miR-6828-3p89.7895NM_001122821
SEThsa-miR-127089.2707NM_001122821
SEThsa-miR-62089.2707NM_001122821
SEThsa-miR-58889.0959NM_001122821
SEThsa-miR-4701-5p89.0959NM_001122821
SEThsa-miR-317188.8924NM_001122821
SEThsa-miR-548av-3p88.5952NM_001122821
SEThsa-miR-769-5p88.2121NM_001122821
SEThsa-miR-451687.7472NM_001122821
SEThsa-miR-548c-3p87.508NM_001122821
SEThsa-miR-607187.4029NM_001122821
SEThsa-miR-10395-5p86.1065NM_001122821
SEThsa-miR-443485.5026NM_001122821
SEThsa-miR-570385.5026NM_001122821
SEThsa-miR-548t-5p85.3607NM_001122821
SEThsa-miR-548az-5p85.3607NM_001122821
SEThsa-miR-392184.8358NM_001122821
SEThsa-miR-4653-5p84.8358NM_001122821
SEThsa-miR-431084.5454NM_001122821
SEThsa-miR-629-3p84.3316NM_001122821
SEThsa-miR-5195-3p84.0503NM_001122821
SEThsa-miR-145-5p84.0503NM_001122821
SEThsa-miR-320283.9804NM_001122821
SEThsa-miR-4668-5p83.726NM_001122821
SEThsa-let-7a-3p83.6909NM_001122821
SEThsa-miR-98-3p83.6909NM_001122821
SEThsa-let-7b-3p83.6909NM_001122821
SEThsa-let-7f-1-3p83.6909NM_001122821
SEThsa-miR-766-5p83.4724NM_001122821
SEThsa-miR-3177-5p82.9729NM_001122821
SEThsa-miR-3663-3p82.4417NM_001122821
SEThsa-miR-7153-3p82.4165NM_001122821
SEThsa-miR-224-5p82.1545NM_001122821
SEThsa-miR-453181.9622NM_001122821
SEThsa-miR-188-3p81.2899NM_001122821
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Motifs and transcription factors (TFs) regulating SET

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SETtaipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
SETtaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
SETmetacluster_151.2ZNF23 (directAnnotation).
SETmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
SETtransfac_pro__M06071ZNF814 (directAnnotation).
SETmetacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
SETtaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
SETtaipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
SETtaipale_tf_pairs__TFAP2C_MAX_TNSCCNNNGGSNNNCACGTGN_CAP_reprMAX; TFAP2C (directAnnotation).
SETtaipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
SETmetacluster_126.14ZBTB12; ZBTB12 (directAnnotation).
SETtransfac_pro__M05403ADNP2 (inferredBy_Orthology).
SETmetacluster_161.18DLX6 (directAnnotation).
SETmetacluster_161.21GBX2 (directAnnotation).
SETtfdimers__MD00350CRX; POU2F1 (directAnnotation).
SETmetacluster_161.34MNX1 (directAnnotation).
SETmetacluster_161.39MSX1 (directAnnotation).
SETtransfac_pro__M04616ISL1 (directAnnotation). LHX3 (inferredBy_Orthology).
SETtransfac_pro__M02869HOXA3 (inferredBy_Orthology).
SEThocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
SETmetacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
SETmetacluster_141.4GLIS2 (directAnnotation).
SETjaspar__MA0748.2YY2 (directAnnotation).
SETmetacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
SETtransfac_pro__M06259ZNF91 (directAnnotation).
SETstark__RCGCMATTWYY1 (inferredBy_Orthology).
SETtaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_reprZNF385D (directAnnotation).
SETmetacluster_141.9TAF1; YY1; YY1 (directAnnotation).
SETtaipale_cyt_meth__ZBTB2_NTTTMCGGTWAN_eDBDZBTB2 (directAnnotation).
SETtaipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
SETtransfac_pro__M04826EP300 (directAnnotation).
SETdbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
SETtransfac_pro__M02913SP140 (inferredBy_Orthology).
SETmetacluster_191.5SPDEF (inferredBy_Orthology).
SETmetacluster_141.2E2F2; E2F3 (directAnnotation).
SETmetacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
SETtaipale_tf_pairs__TEAD4_ETV1_RSCGGAAATRCM_CAPETV1; TEAD4 (directAnnotation).
SETtaipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
SETtaipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
SETtaipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAP_reprERG; TEAD4 (directAnnotation).
SETtaipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAPERG; TEAD4 (directAnnotation).
SETtaipale_tf_pairs__HOXB2_ETV1_ACCGGAAATGA_CAPETV1; HOXB2 (directAnnotation).
SETtaipale_cyt_meth__CDX2_NRTCGTAAANNN_eDBD_methCDX2 (directAnnotation).
SETtaipale_tf_pairs__POU2F1_ELK1_NCCGGATATGCAN_CAP_reprELK1; POU2F1 (directAnnotation).
SETtfdimers__MD00475FOS; FOSB; FOSL1; FOSL2; JUN; JUNB; JUND; ZNF333 (directAnnotation).
SEThocomoco__OTX1_HUMAN.H11MO.0.DOTX1 (directAnnotation).
SETmetacluster_178.5PAX3; ZNF337; ZNF337 (directAnnotation). PAX3 (inferredBy_Orthology).
SETtransfac_pro__M06237ZNF846 (directAnnotation).
SETtransfac_pro__M01253CNOT3 (directAnnotation).
SETtransfac_pro__M12697ZNF142 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."